Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02435 ATGCCTAGAAATGACATTTTCTATGATTTTCCCGGCTTAGTGGATCCACCACCTCCAGCATCTAATGAAGAGCCATCCCCTAAGAAAACTGATACAACTTTGTTCTTCCTTGGAGGGATAGTGATGTTCATCGTATTGTTGATAATTTTGGTTGTATTTTGGAAGCGTATCAAAGGGAGCAAAAATACAACACCTCCTAAAACTACTAAAGGCAAACAAGGGAAACTTACTGAAACAGCAGAAGTTATGGATATGATGTTTTCATCTAAACAACAGCAAGGATCCATGGAGTTGTTGAGTGGGAACCTTAGGACAATTAGTTACTTTGACTACCAGATATTAAGAAGAGCAACCAAGAATTTTTCTCCTACTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGAACAGAAGTTTGGACTTCTTCATATATGGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGATTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTGGGTTATACAGCACCTGAATACGCTTTAAGAGGAGAATTATCAGAAAAGGCGGATATCTATAGTTTTGGAGTTCTGTTGCTCGAAATTATTTGTTGTAGAAAAAACACAGATCTCACTTTGTCATTGGAAATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAACTCAAAGATTATGGAGCTTGTAGATCCAAAGCTGAAAGAAGAGGGGTTCGTGGAGAAAGATGTTATGCAAGCATTCCACGTGGCATTCCTCTGCCTCCAGCCACTTGCAAATCTAAGACCTCCGATGTCAGAGATCGTGGCACTCTTGACATTCAAAATTGACATGGTCACAACACCAATGAGGCCTGCGTTTCTTGATCGAAGGCGCAAAACTGATTTTCAAACCCCTTCCCCAGAAGTAATATCCATGCTTTCACATCTCCCATGA 1113 0.4115 MPRNDIFYDFPGLVDPPPPASNEEPSPKKTDTTLFFLGGIVMFIVLLIILVVFWKRIKGSKNTTPPKTTKGKQGKLTETAEVMDMMFSSKQQQGSMELLSGNLRTISYFDYQILRRATKNFSPTNLLGSGGFGPVYRNRSLDFFIYGNNADRFLNWSTRFQIVLGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYALRGELSEKADIYSFGVLLLEIICCRKNTDLTLSLEMQYLPEYAWKLYENSKIMELVDPKLKEEGFVEKDVMQAFHVAFLCLQPLANLRPPMSEIVALLTFKIDMVTTPMRPAFLDRRRKTDFQTPSPEVISMLSHLP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02435 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Aip03g02435 370 Gene3D Transferase(Phosphotransferase) domain 1 141 339 - -
Aip03g02435 370 SMART serkin_6 121 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02435 370 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 100 136 - -
Aip03g02435 370 PANTHER RECEPTOR-LIKE KINASE 100 136 - -
Aip03g02435 370 PANTHER RECEPTOR-LIKE KINASE 137 349 - -
Aip03g02435 370 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 137 349 - -
Aip03g02435 370 ProSiteProfiles Protein kinase domain profile. 62 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02435 370 SUPERFAMILY Protein kinase-like (PK-like) 105 351 IPR011009 -
Aip03g02435 370 Pfam Protein kinase domain 161 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02435 370 Gene3D Phosphorylase Kinase; domain 1 88 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02435 Aip-Chr3 39793297 39795650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02435 138 347 Receptor kinase-like Gene Family AT1G56120 47.143 1.50e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g02435 Pkinase 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02435 - - adu:107478947 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02435 03 39793297 39795650 Aip03g02435 03 39793297 39795650 ECH
Aip01g03342 01 136525280 136527590 Aip03g02435 03 39793297 39795650 PCT