Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02434 ATGAGGCGGGAAACGACATTGGCGGAGGAGGAGGTGGTTGGAGGGGTGGGAAGGAAATGGAGTAGTAGTGGTGTTGGAGTTGGTGATGGTCGAAGGAAAGAGAGGGTAAGGATGGTGGAGGGGATGGCGATGGTGAAAGGGGTTGTGGAGGCAGAGAATGGTGGATGCTATGCGCCCCTGCCTCTTCCCTCCACCCACTTCCTCTGTCTTCTTCGTCAAACGATGAACCCCGTTTCTTCTTCTAGCCCCTCTTTCCTCCGCTTCTTCCTTTACTCACTGTCCACTGAAGAATTGTCTATCCTTTCTAAGCCTTCTGGCGATGCGAATTCAGAGATTCGATTCATGAAGAGGGGAGATGCTACCAGTTGCAGCAAGGGTCTGGGGAGAGAAGGCTGTCTTCCTCATCATAGGGTTGCTATGATGGACTCTAAACTCCTTGCTCCCCATTTTTACCGATGGGAGACCCCATATATCAAAATTAATAAGATTATTAGGTTAAGCCTTCTTCCACAACGAAAATTGGGTTTTGCTCAAAAGAAGTTGATCTTTAATGGAGCCTCGAGTTGGAAATTAGTTCTGTATCGGTCGGAAAATTGGGAAGTATTCCATAGAATTGTGAGAAGCAGAACAGAAGGGCGTGATTCTCTTGGAAAGAGACCGTGGAAAGGTGTTCTCATGTTTGGGCCTCCCGAAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCCAAATGGCGTGGTGAGAGTGAACGCATGGTGCGGTATTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCACTGAGGCGAAGGCTGGAAAAGCGTATATACATTCCTCTTCTGAATTTTGAGAGTCGTAAAGAGTTGATCTGTATCAATTTGAAGACTGTGGAGGCAAGTTAG 1146 0.4599 MRRETTLAEEEVVGGVGRKWSSSGVGVGDGRRKERVRMVEGMAMVKGVVEAENGGCYAPLPLPSTHFLCLLRQTMNPVSSSSPSFLRFFLYSLSTEELSILSKPSGDANSEIRFMKRGDATSCSKGLGREGCLPHHRVAMMDSKLLAPHFYRWETPYIKINKIIRLSLLPQRKLGFAQKKLIFNGASSWKLVLYRSENWEVFHRIVRSRTEGRDSLGKRPWKGVLMFGPPETGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRYLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLLNFESRKELICINLKTVEAS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02434 381 SMART AAA_5 220 363 IPR003593 -
Aip03g02434 381 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 219 380 - -
Aip03g02434 381 Gene3D - 362 379 - -
Aip03g02434 381 PANTHER AAA DOMAIN-CONTAINING 219 380 - -
Aip03g02434 381 CDD AAA 219 361 - -
Aip03g02434 381 Pfam ATPase family associated with various cellular activities (AAA) 224 361 IPR003959 GO:0005524|GO:0016887
Aip03g02434 381 ProSitePatterns AAA-protein family signature. 333 352 IPR003960 GO:0005524|GO:0016887
Aip03g02434 381 Gene3D - 218 361 IPR027417 -
Aip03g02434 381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 376 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02434 Aip-Chr3 39763293 39766519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02434 185 381 Calmodulin-binding Proteins AT3G56690 42.000 2.72e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02434 K07767 - egr:104423135 309.686