Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02433 ATGAACCCCATTTCTTCTTCTAGCCCCTCTTTCCTCCGCTTCTTCCTTTACTCACTGTCCACTGAAGAATTGTCTATCCTTTCTAAGCCTTCTGGCGATGCGAATTCAGAGATTGGGATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGGCCTCCCGAAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCCAAATGGCGTGGTGAGAGTGAACGCATGGTGCGGTATTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGACTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCGCTGAGGCGAAGACTGGAAAAGCGTATATACATTCCTCTTCTGAATTTTGAGAGTCGTAAAGAGTTGATCCGTATCAATTTGAAGACTGTGGAGGCAAATTATCATGTTTTACCTTTGCACCAGGTGGCCCCTGATGTCAATATAGATGACGTGACTCGCCGTACAGAAGGCTATAGTGGAGATGATTTGACAAATGTATGTTGTGATGCTTCCCTGAATGGTATGAGGCGTAAGATAGTGGGAAAACACGCAATGAGATCAAGAACATGCCCAAGGATGAGATTTCAAAGGATCTTGTTGCTATGTGTGACTTTGAGGAAGCTTTGA 840 0.4357 MNPISSSSPSFLRFFLYSLSTEELSILSKPSGDANSEIGIRRPWKGVLMFGPPETGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRYLFDLARAYAPSTIFIDEIDSLCNARGTSGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLLNFESRKELIRINLKTVEANYHVLPLHQVAPDVNIDDVTRRTEGYSGDDLTNVCCDASLNGMRRKIVGKHAMRSRTCPRMRFQRILLLCVTLRKL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02433 279 ProSitePatterns AAA-protein family signature. 156 175 IPR003960 GO:0005524|GO:0016887
Aip03g02433 279 Gene3D - 185 257 - -
Aip03g02433 279 Pfam AAA+ lid domain 216 250 IPR041569 -
Aip03g02433 279 Pfam ATPase family associated with various cellular activities (AAA) 47 184 IPR003959 GO:0005524|GO:0016887
Aip03g02433 279 Gene3D - 39 184 IPR027417 -
Aip03g02433 279 SMART AAA_5 43 186 IPR003593 -
Aip03g02433 279 PANTHER AAA DOMAIN-CONTAINING 39 260 - -
Aip03g02433 279 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 39 260 - -
Aip03g02433 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 248 IPR027417 -
Aip03g02433 279 CDD AAA 41 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02433 Aip-Chr3 39757271 39759578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02433 33 250 Calmodulin-binding Proteins AT3G56690 39.819 1.27e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02433 K07767 - zju:112489859 380.948