Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02432 ATGAGAGATATATGCCATCTTTGTGAAAagggaaaCCCCACCCCAAACTCACCATACGGTACCCTAATCCCCAATTCCTTTCCTCCCTGTTTACTCACCCGTCGCCGCCATCTACTCTACTCTCCGCTGGTCTCAGCATTCGCCGTTGCCCTTCAGCCGAGCCGTCGCCATTGCCGTCCAATCCATCTTCCAGCGTCGTTTGTAGGCCCTCCCTCCCCGTCTCCTCTTCTCTCTTCTCTCGTCGAGTGGTTGTCAGCGGTGTGGTGCTCTATCCCCCCCTGCATCCTCCACTTCCAGAGTAACAATGGAGCCTCAGACTCAGGGATTGTAGGCTATATTTGTTCTGTTTTGTGCTACAAGTATGTTGGTGTAGCTAAGATTCATGCCAATTTAGAAGTATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCCTAATGTTAGTGATCAAGTGGATGAAGACGTAACTTCTGATGCGGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTAATTTTTCAAGTCTATCTATGAAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAGCATATGTTTGTTCCTGTGAAGGGTATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAATCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTTTTCTTCGATGCGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACACAACCATGATCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATACCAAACATATTTGGGTCATTGGCTAGCCAGTGTGGTGGGTACGAAAACGTTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCGAAGCAAAGAAGACAATTACCTGATGATTTAACATCTGCAATGGCTTACCTGGAAACGCTAGCAGCAAGGGATCGAAACTTGTTCTATAGTATTGAAAAGGGCAGAGAAGGAGTGTTTCGACAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTGTTCGGGGATGTGCTAGCATTTGACGCCACATATAAGAAGAATAGATACAGATTGCCGGTGGTAATATTCTCGGGAATTAACCACCATAATCAAACCGTTGTATTTGGTGCTGCGATAGTTTCGAATGAGAGGAAAAAGCACTTATGTGTGGTTACTAAAACAGCTTCTCATAGCAATGAAGGGAAAGATACCGACTTCAGTAATTACGGATGGTCATCAATCGATGGCTATCGCTATTCAGGAGGTGTTTCCGAATGCACATCATAG 1482 0.4224 MRDICHLCEKGNPTPNSPYGTLIPNSFPPCLLTRRRHLLYSPLVSAFAVALQPSRRHCRPIHLPASFVGPPSPSPLLSSLVEWLSAVWCSIPPCILHFQSNNGASDSGIVGYICSVLCYKYVGVAKIHANLEVSNSQRHTSDQNVPNVSDQVDEDVTSDAVDMDQYRINSWEDIGKINFSSLSMKNICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKAYVCSCEGYRLEKWNHMKNRVREPKSETRCGCMSKLHVFFDAVTESWVVRDFCDEHNHDLVVPKLARMLRSHKKMTEPDISQMNHMKEVGISIPNIFGSLASQCGGYENVNFSIKDMHNQVAKQRRQLPDDLTSAMAYLETLAARDRNLFYSIEKGREGVFRQIFWCDGRCQLDYDLFGDVLAFDATYKKNRYRLPVVIFSGINHHNQTVVFGAAIVSNERKKHLCVVTKTASHSNEGKDTDFSNYGWSSIDGYRYSGGVSECTS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02432 493 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 192 452 IPR031052 GO:0006355
Aip03g02432 493 Pfam FAR1 DNA-binding domain 200 289 IPR004330 -
Aip03g02432 493 PANTHER OS02G0262500 PROTEIN 192 452 - -
Aip03g02432 493 Pfam MULE transposase domain 409 458 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02432 Aip-Chr3 39752008 39756312 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02432 FAR1 3.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02432 - - ahf:112719698 642.499