Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02431 ATGGAAGATGAAAAAGCCTGCATCACAAGTCTAACTCTGGGTTTGGGAATTGGAGGAGGAGGAGGAGGGTATCCCCCAAAGAAGAAGCAGAAAATGATGATGATAATGAAGAACAAGCCTATTAAGCCTGTGCCTTCGCTGGACCTAACTTTTGATGATGATGAAGCTTTTCCGAAAGAAGCCATTGATGATGATGATGATGATGATGATGATGATGATCGAGAAGAAGGATTATTCATCTCTTTGAATAATAAGAGAGTCGGTGAAGAACACAGCTACAATTATAATAAGCGCTGCCCGGCGAATGGAAAAAACAGAGATGACAGCTATAATGATGAGAATAATAATAATCATAATAATAATAATTATTGCAGCAGAAAGAAACTGAGACTCACCAAGGATCAATCAGCTTTGCTTGAAGAAAATTTCAAGAATCATACCACTCTTAACCAAGCTCAGAAACAGGCACTTGCTAAGCAATTGAATTTAAAGCATAGACAGGTTGAAGTTTGGTTTCAGAATAGAAGAGCAAGGACAAAGCTGAAGCAAACAGAGGTGGATTGCGAGTTCTTGAAGAAATGCTGTGAGAGATTAACAGATGAGAATCTAAGGTTGAAGAAGGAATTGCAGGAGCTACGTGCAATCAAAGCTGGACCAACACAATCACCAACACCGCCATTGTACATTCAATTACTCTCTTCTAAATCTTCGCCCTTGACTATTTGTTCTTCTTGTGAGGAGCTATTGAAGAAGACCAAACAAGAAAATATATAA 774 0.3863 MEDEKACITSLTLGLGIGGGGGGYPPKKKQKMMMIMKNKPIKPVPSLDLTFDDDEAFPKEAIDDDDDDDDDDDREEGLFISLNNKRVGEEHSYNYNKRCPANGKNRDDSYNDENNNNHNNNNYCSRKKLRLTKDQSALLEENFKNHTTLNQAQKQALAKQLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLTDENLRLKKELQELRAIKAGPTQSPTPPLYIQLLSSKSSPLTICSSCEELLKKTKQENI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02431 257 MobiDBLite consensus disorder prediction 42 123 - -
Aip03g02431 257 MobiDBLite consensus disorder prediction 57 76 - -
Aip03g02431 257 CDD homeodomain 126 183 IPR001356 GO:0003677
Aip03g02431 257 Pfam Homeobox associated leucine zipper 182 215 IPR003106 GO:0006355|GO:0043565
Aip03g02431 257 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 10 252 - -
Aip03g02431 257 Coils Coil 181 215 - -
Aip03g02431 257 Gene3D - 118 187 - -
Aip03g02431 257 ProSiteProfiles 'Homeobox' domain profile. 122 182 IPR001356 GO:0003677
Aip03g02431 257 PANTHER - 10 252 - -
Aip03g02431 257 ProSitePatterns 'Homeobox' domain signature. 157 180 IPR017970 GO:0000981|GO:0006355
Aip03g02431 257 SMART halz 182 225 IPR003106 GO:0006355|GO:0043565
Aip03g02431 257 SMART HOX_1 124 186 IPR001356 GO:0003677
Aip03g02431 257 SUPERFAMILY Homeodomain-like 114 183 IPR009057 -
Aip03g02431 257 Pfam Homeodomain 126 180 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02431 Aip-Chr3 39716506 39718308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02431 125 248 Homeobox Transcription Factor Family AT4G37790 68.548 2.01e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aip03g02431 Homeodomain 4.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02431 K09338 - gmx:100778922 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03340 01 136511020 136511917 Aip03g02431 03 39716506 39718308 PCT