Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02423 ATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAGGCATAGATCTCAACCATGCAAATCTCCAAGGAATCCTTGTCAAAGAGCTATCTTTACTCACTGACATATCCCTTTTCCACCTTAACAGTAACAGTTACTTCTCTGGGACAATCCCTGAAGAACTCTTCTACAAGAATTTTGATGCACTATTTCTCAACAACAATCAATTTGAAAGTGAAATTCCTCAGAATCTTAGAAATTTCCCAGCATCAGTGATAAATTTAGCCAATAACAAGTTGAGTGGAAACATCCCAGCAAGTTTTGGATTCATGGGTTCTAAATTGAAGGAGATTCTGTTCCTGAATAACCAGCTAACTGGTTGCATCTCTGAAGAAGTGGGGCTATTCACTGAGATTCAAGTTCTGGATGTTAGCTACAATACTCTCATGGGTCATGTACCAGACACATTGTCTTGTCTGCAAGACATTCAAGTCCTTAACTTACCAATTCAGGGTTCCCTTCTGATGGATGATGGGGAGCTTGATTTCTCGAACCAGGAAGTGTTCTCAAGTCCAAACATGGCTGAACTTCCAAGCAGTGGATCAATGGATTGCTTCTTTGAAGAACTCCTCAAGGACAGCCATGCTTGCACGCATACCCACATCTTTGGAACTGACGACACTGCTGAGTCTGCTGAAAAGAAGTCAAAGAAGCGCCCATTGGGTAATCGGGAAGCCGTACGCAAGTACCGCGAGAAGAAGAAGGCTCGGGCTGCTTCTTTGGAGGATGAGGTTGTCAAATTGAGAGCTTTGAACCAGCACTTGaaagaagaagaagaagagatgaacaagaggaagagatga 840 0.4143 MGASASAFPVVAGIDLNHANLQGILVKELSLLTDISLFHLNSNSYFSGTIPEELFYKNFDALFLNNNQFESEIPQNLRNFPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCISEEVGLFTEIQVLDVSYNTLMGHVPDTLSCLQDIQVLNLPIQGSLLMDDGELDFSNQEVFSSPNMAELPSSGSMDCFFEELLKDSHACTHTHIFGTDDTAESAEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVKLRALNQHLKEEEEEMNKRKR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02423 279 Gene3D Ribonuclease Inhibitor 2 82 IPR032675 -
Aip03g02423 279 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 279 IPR004827 GO:0003700|GO:0006355
Aip03g02423 279 Gene3D Ribonuclease Inhibitor 83 188 IPR032675 -
Aip03g02423 279 PANTHER LRR/EXTENSIN 5 44 - -
Aip03g02423 279 PANTHER LRR/EXTENSIN 45 161 - -
Aip03g02423 279 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 5 44 - -
Aip03g02423 279 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 45 161 - -
Aip03g02423 279 Coils Coil 236 279 - -
Aip03g02423 279 MobiDBLite consensus disorder prediction 218 241 - -
Aip03g02423 279 SUPERFAMILY Leucine zipper domain 228 274 IPR046347 GO:0003700|GO:0006355
Aip03g02423 279 SUPERFAMILY L domain-like 14 160 - -
Aip03g02423 279 CDD bZIP 229 274 - -
Aip03g02423 279 SMART brlzneu 223 277 IPR004827 GO:0003700|GO:0006355
Aip03g02423 279 Pfam Basic region leucine zipper 225 276 IPR004827 GO:0003700|GO:0006355
Aip03g02423 279 Gene3D - 225 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02423 Aip-Chr3 39473502 39474562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02423 10 160 Leucine-rich Repeat extension Gene Families AT3G22800 39.196 1.16e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip03g02423 bZIP_2 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02423 - - gsj:114407518 243.047