Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02396 ATGGAGCACCCTTGCATGCTCCAAATAACGGTGTTTGGGTGCGGTGGGTTCACGTTGCATGATGCCATCCATCATGTGCTTGATGACGGTATAGGCGGGAGCTTGTTCTTCAACCTGGTGGCCGAATTGGCTCGCGGGTTGACTCAAATACTGGTTGAACAAGTTTGGAATCGTGAGGTGTTGTTGAGAGCAAGGAACCCTCCCCGGGTGGAGTCAGCGTTGGTCGGAAAGTTTGTGAATTTGGAAAAAGGGTTTTGCCGAACCAAACAGATGCCTGTGATGTTGTGA 288 0.5069 MEHPCMLQITVFGCGGFTLHDAIHHVLDDGIGGSLFFNLVAELARGLTQILVEQVWNREVLLRARNPPRVESALVGKFVNLEKGFCRTKQMPVML 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02396 95 Pfam Transferase family 6 77 - -
Aip03g02396 95 Gene3D - 1 75 IPR023213 -
Aip03g02396 95 PANTHER ACYL TRANSFERASE 4 1 85 - -
Aip03g02396 95 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02396 Aip-Chr3 38210895 38211182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02396 6 69 Monolignol Biosynthesis Gene Families AT5G48930 40.625 1.70e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02396 - - gmx:100817021 119.783