Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02395 ATGAGAACTCAACGGCCTCACTGTCTCCTCTTCCTTTTCCTTCTCTGCTTGCTAGCCACATTCTCGAACCTCCACCGGACAGTCACCGCAGTTAACGATGCCGAATCTCCCGCTGCACCCGCAGTTGACGACGGCGATACAACCTTCATCCGAACGAGCTGCAACAACACGCTCTACCCGGACGTTTGCTACTCCTCCCTCTCTCGCTACGCCAATGCGGTCCAGCAGGATCCCGGCCAGCTCGCTCGCGTCGCTATCGCCGTCACACTCTCCAAGGTCCACCGCACTGCCTCCTACGTCTCCAACCTCACTCGCGAGGCCGACTACACCGCCGATTCGCGCGCAACCTCCGCGCTTCACGACTGTTTCACGAATCTCGGTGACGCCGTCGACGAAATTCGCGGTTCGCTGAAGCAGATGCGGCAAATTGGAGCCGCCGGAACCGGCGCCGGCTCGTTCCTGTTCCAGATGAGCAACGTACAGACGTGGATGAGCGCCGCACTCACCGACGAAGAGACTTGTACGGACGGATTCCAGGATGTGGCGGAGTGTCCGGTTAAGGCGGACGTGTGCGACCGCGTCACGAAGGTGAAGAAGTTCACGAGCAACGCTTTGGCTCTCGTCAATACCTACGCAAACAAGGGAGCACCGTGA 654 0.5948 MRTQRPHCLLFLFLLCLLATFSNLHRTVTAVNDAESPAAPAVDDGDTTFIRTSCNNTLYPDVCYSSLSRYANAVQQDPGQLARVAIAVTLSKVHRTASYVSNLTREADYTADSRATSALHDCFTNLGDAVDEIRGSLKQMRQIGAAGTGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCDRVTKVKKFTSNALALVNTYANKGAP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02395 217 Pfam Plant invertase/pectin methylesterase inhibitor 49 207 IPR006501 GO:0004857
Aip03g02395 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 211 IPR035513 -
Aip03g02395 217 TIGRFAM PME_inhib: pectinesterase inhibitor domain 36 211 IPR006501 GO:0004857
Aip03g02395 217 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 10 214 - -
Aip03g02395 217 SMART PMEI_2 45 207 IPR006501 GO:0004857
Aip03g02395 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 211 IPR035513 -
Aip03g02395 217 CDD PMEI-like_3 52 213 - -
Aip03g02395 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02395 Aip-Chr3 38188990 38189927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02395 32 209 Carbohydrate Esterase AT1G53840 25.946 1.79e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02395 - - gmx:100812251 321.627