Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02384 atgtccgcgaaacccgtcactgagccctgcggaaggttattgaaccaccgtattATCCAGCAGAGGAGCGAACCAACAAGAGGACGACAAAGACGAAGGTTTACAGATACAGAGGAGGCACGACGCCGGGGGCAGAGGAGGCAGAACACGCGGAGCCAAGATAGCCAGTTCGACACAGACGGAGGTGAGCAGTGGCGCACACGAAGCAGATTCGACGAGCGACTAGAGGCGCTTGTGACGGAACAAACACCATGGAGGACCACGACGCCGCCGCAGACACTTCCCAGGGGCTACGCCGGTGATTCTTCTTCCGGCAGCAGCTGCATGTTTCCTCGCAGATATAGACGGCGCGAGCTTCTTCCTCTCTCCGTCCACACTCTCTCCATCGCACGAGCTTCTTCCTCTCTCCTTCTTATTTTGCAATATAAAACTGTGCTCCTCTGCTCCCTTCGTCATCGTCCCTTGGAGGAGCTTAATTTGGGAAGGGATAGAATAAAAATATTGGAACATGAGCTTTCATGCAGATCTGCTTCAATCAAAACAAATGCCCTAAAAACTGGATTTCAAAGATCGAAAAGGGGAGGCATCAAAAGACAAATAGAAAACACGGGAGTAAAAAGAGCAAGGCCTAAGAGTAAGGGACCAACAGTTTCAGATACAATGGAGAAATTGCCAGAGGAAGATCCTGTTGAGGAGGTACTAAGGAGACTATTGGACTTTGGCAAGAAACTTCATTCTCCTAATGCTCTTCTCATCAATGGGCAAAGAGATTCTGCTGTCTTTACCGGTCAAGAAGGGAAGACTTACAAATTTAGAGTGTCCAATGTTGGGTTAACAACATCAATCAACTTCAGGATTCAAGTTCCGGCTATTGTTCATGGAAACTTGAAGCTCTCCGAGAGCTATGCAATCCTAGTATATCTTGCTTCTGCTTTTACTGGAATTGCTGACCACTGGTATCCAACTGAGCTGTCTAGAAGAGCCAAAATTAACTCAGTAATGGATTGGCATTATTCTAATTTACGAAATGAAGCAGTGAATTATGTAATACATACTACACTAGCACCTGCCCTTGGCCGTCAACTGAATCCAAAAGCATCTACTGAAGCAGAAAAAGTTTTTTTATCTTCTTTGAAAGCACTGGAGGATTTCTGGTTCAATGGAGATAATGAAGGATTTCTGTGTGATAGCACCCAACCATCGGTGGCTGATCTCAGCATGGTTTGTGAACTTATGCAACTTGAGGTTTTGGATGAGAGGGATCACAGTCGAATATTATCTCCTTACAAGAAAATTCTTCAGTGGATTGAGAATACAAGAAATGTCAAAGTAATAAATTTGTGGCATATTGTGGGCTTTGTTCTATATGCAAATCAGGAAGAAATAGTCTCTCCTCCCTAG 1401 0.4297 MSAKPVTEPCGRLLNHRIIQQRSEPTRGRQRRRFTDTEEARRRGQRRQNTRSQDSQFDTDGGEQWRTRSRFDERLEALVTEQTPWRTTTPPQTLPRGYAGDSSSGSSCMFPRRYRRRELLPLSVHTLSIARASSSLLLILQYKTVLLCSLRHRPLEELNLGRDRIKILEHELSCRSASIKTNALKTGFQRSKRGGIKRQIENTGVKRARPKSKGPTVSDTMEKLPEEDPVEEVLRRLLDFGKKLHSPNALLINGQRDSAVFTGQEGKTYKFRVSNVGLTTSINFRIQVPAIVHGNLKLSESYAILVYLASAFTGIADHWYPTELSRRAKINSVMDWHYSNLRNEAVNYVIHTTLAPALGRQLNPKASTEAEKVFLSSLKALEDFWFNGDNEGFLCDSTQPSVADLSMVCELMQLEVLDERDHSRILSPYKKILQWIENTRNVKVINLWHIVGFVLYANQEEIVSPP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02384 466 SUPERFAMILY Cupredoxins 241 287 IPR008972 -
Aip03g02384 466 SUPERFAMILY GST C-terminal domain-like 317 441 IPR036282 -
Aip03g02384 466 Gene3D - 216 290 IPR008972 -
Aip03g02384 466 MobiDBLite consensus disorder prediction 22 49 - -
Aip03g02384 466 MobiDBLite consensus disorder prediction 1 65 - -
Aip03g02384 466 Gene3D - 316 461 - -
Aip03g02384 466 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 281 443 IPR043377 -
Aip03g02384 466 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 323 466 IPR010987 -
Aip03g02384 466 MobiDBLite consensus disorder prediction 81 106 - -
Aip03g02384 466 SUPERFAMILY Thioredoxin-like 280 311 IPR036249 -
Aip03g02384 466 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 281 443 - -
Aip03g02384 466 MobiDBLite consensus disorder prediction 204 225 - -
Aip03g02384 466 Pfam Multicopper oxidase 244 287 IPR001117 -
Aip03g02384 466 MobiDBLite consensus disorder prediction 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02384 Aip-Chr3 37934981 37942346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02384 282 440 Glutathione S-transferase Gene Family AT5G41210 61.006 3.64e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02384 K00799 - gmx:100799229 235.343