Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02379 ATGGATCCTCGACCAATTACACGATGTGGGTGTGGTGCACAAATAAAGGTTCACGTTGATCAAAGCACTGGCCGTTGGTTCGTAGATAAGTTTTGTGATGAACACAACCATGAGATGCTAACTGCAAGGTTCCGGGGGTTGTTGCGTTCTCATAGAGTAATCAAGGAAGGGGACATGCATCAAATTAACTCGATGAGAAAAGCTGGGATGCGTGTGCCAACCATATTTCGTGCATTTCCCACCCAATGCGGGGGATTTGAGACAGTTGGATTTGAAATTAAAGACATCTACAATGCAATAGAGAAGCAAAGAAGAGTGAGGGCGCGTGATGCGGAGTGTGCCTTAAAGTATTTGTGA 357 0.451 MDPRPITRCGCGAQIKVHVDQSTGRWFVDKFCDEHNHEMLTARFRGLLRSHRVIKEGDMHQINSMRKAGMRVPTIFRAFPTQCGGFETVGFEIKDIYNAIEKQRRVRARDAECALKYL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02379 118 PANTHER OS02G0262500 PROTEIN 2 118 - -
Aip03g02379 118 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Aip03g02379 118 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 118 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02379 Aip-Chr3 37875763 37876119 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02379 FAR1 7.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02379 - - aip:107633138 195.667