Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02361 ATGTTCCGCAGGGTTGGTCGAATTATGAAGCCATACTTGCCACTTGGTATAGGTGGAGTTTTTGATGGTGTCATTGAGAATATGCATTTGAATTGGAGACATCAGGCATTAAAGCGTTCAATTGCCATGCAGCGCCACGAGGTTCCAAATTTTTATGTCAATGGCAAATCTGTAGATTTTCTTCTATATCTTTCATGTCTCAATCGATCTGGACGACATGCCGTTGTATGCAGCGAGGTAGTGCTAGATGCTATTCCTGTCACCACTATGATTCATCAACCTGATCTTTCTGTTACTATGAGTGATTCCTCTCAAAATGACAAAAATGCTAAGAATCCTCCTGGGTACGATGCAATGGTTTTAGAAGCGTTGTCAGTTCTGAAAAATGCTAATGGATCTAACCTGAATGCCATTGTTAACTTTTTTGAGGACTATCTTGTTGGGACACCTGATGAACTCAAGTCTGCTCTTTTAGAATCTTTCTCGGCTTGGAAATCGGTCGTTATCAATGTTATTGTTAATCTTATACTAGTTCAAAGTGTGGGAGACTACCACACAAAAACTTATTTCTAA 573 0.3944 MFRRVGRIMKPYLPLGIGGVFDGVIENMHLNWRHQALKRSIAMQRHEVPNFYVNGKSVDFLLYLSCLNRSGRHAVVCSEVVLDAIPVTTMIHQPDLSVTMSDSSQNDKNAKNPPGYDAMVLEALSVLKNANGSNLNAIVNFFEDYLVGTPDELKSALLESFSAWKSVVINVIVNLILVQSVGDYHTKTYF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02361 190 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 1 45 - -
Aip03g02361 190 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 1 45 IPR045278 GO:0000375|GO:0003729
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02361 Aip-Chr3 37640633 37643589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02361 86 143 Single Myb Histone (SMH) Gene Family AT1G17520 43.103 6.95e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02361 - - ahf:112707684 74.3294