LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g02358	ATGAACATTGATGACAATAAGAACTTAGAGGAGTCTATCGAATGTGATGAGCTGTGTTTTGAGTATGATAGTAGTTCTGATAAGGAGGAGGATGAAGATATTATCAACAATGATGATAAATTTAGTGAATCCATGGAGGTGTCGAATTGTAGCTATAAAATTCAAGAAGTTGAGAAGAAGTTGAACGAATTAAGCTATGATGACATATGGGGTATTGAATTTGACACCGTTGATCAATGTTGTGATTTTTATAGAAATTATGCAAGAGTGCACGGTTTTGTTGTGAGGCTTGACGAAAAAGGACAAGATTTCAATGAAAACCTTAATATGCGACAGATGGTTTGTAACAGAGAGGTTACACGTAGAAAAAAGTACTTAGAGATGGAGAACAGAAAAAAGTATCTCAAGCCAATGACACATGTAATGTGTCAAGCAAAGATTAGATTTCTCTATGACTTGATTTTACAAAAGTGGCGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAATTTGTTCCGACATATCGAACAATGACTGACGCTGATAAAGCACAGGCTGATAGTTTGTACTTTTATGGTGTTAGAAATTGTCATATAATGGGGTTCACGATGGCACAAAAAGGAGCTCCGAACAggacgggtgataaaccactattttatggtttatattgtgcttaa	702	0.3419	MNIDDNKNLEESIECDELCFEYDSSSDKEEDEDIINNDDKFSESMEVSNCSYKIQEVEKKLNELSYDDIWGIEFDTVDQCCDFYRNYARVHGFVVRLDEKGQDFNENLNMRQMVCNREVTRRKKYLEMENRKKYLKPMTHVMCQAKIRFLYDLILQKWRVTKFEETHNHDLIPPKYIQFVPTYRTMTDADKAQADSLYFYGVRNCHIMGFTMAQKGAPNRTGDKPLFYGLYCA	233

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g02358	233	Pfam	FAR1 DNA-binding domain	82	172	IPR004330	-
	Aip03g02358	233	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	23	175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g02358	Aip-Chr3	37473220	37473921	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aip03g02358		FAR1	6e-15	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g02358	-		-	aip:107607226	395.586