Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02349 ATGGGCAGCCCAAAGCCCATTTCTACTGGAATTTGTAAAAATGGTTTTATAGTCTCTATTCATGGCGAGGTTGAAGCGAAACATCGATTGCTTTTGGTTCAATGGATATCTACCCTTCTTCCTTCACTGAACTTACCGATAAATATCACGGACGATGTCTTAAGAGCATGCTTGAGGGATGGTATCGTTTTGTGTCAGATACTGAACAAGCTTCGTCCAGGTTCCGTCCCGGTGGTTAGTGAATTTGATCATGAAGAAAATCTAAAATCGTTTCTGAAAGCTATGGATGCATTGGGATTGCCTCAGTTTTCAATATCAGACCTGGAGAAGGGATCCATGAAGGTCGTTGTGGATTGCTTGTTATCACTCCGAGCAAAGAGTTTGCAGAATGTTTTCTGGGATAACAATTCTTCTACCACTAATTCCAAAGTAGGAAGCCCTCACGGGATTACAGCTCCCAGTGTTCCATTTCCACCATCATCCGAGACGACCACAAAGCACCATCGTTCCCTGAGTAGCCCATTCTTGACAGAGTCACCAACTTCATTACTGCACCAGGGTCACAAGTTCCACGAGGGATACGAGGTGTTTCAAGGGAAAGAAGAAAGTTACGCAGATCTTTCTCCAACAAAAATATCAGAAATGGTGAAATCAGTCAGTTTAGACAATGCTCCAACTCAGTCACTTCTGGGTGTTGTGAATGGTATTCTTGAAGAAACCGTTGAAAAACGAAACGGTGAAATGCCTTATCGCGTCGCCTGCTTGTTGAGAAAAGTTTCCCAGGAGCTTGAGCGCCGCATGTCAGCCCAAGCAGAACATTCAAGAACTCAAAGCAATCTTTTCAAGGTTCGTGAAGAAAAGTATCAATCCAGAATTAGAGCACTTGAGGCGCTTGCGGTTGGAAATAATATAGAAGAGGATGAGGCTGAGAAGTTCGCAGTGGAAGAAAATAAGCCTGATGACAGGGATTTTGAAAGGTCCATGAAAAAGCAGGAGGACAAAATTTTGGAAATTTCAGCATTGACCGAAGATTTAGAAACAAGCAAAAAAGCACTTGAATTAAAATGCTCACGATTAGAAGTAGAGGCTATGGAAGCTAAAGCAGAAATAGAACAGAAAACTAAAGCATATGAGCAGCAATTAGAAGAATGGCGCAATAAGTGTAAAGAGCTTGAGTCTTCTTATGTTTCAAAATATAACGAGTGGAACATGAAAAAGAACCAGATGCTAAACGTTGTAACTTTTCAATCTAGTAAGCTAGAGATAATGAAATTATCTTGGGAGTCCATTAAGCAAGATGTTATGCAAGAGCAAAAGGTTTATGCAGAGGAGTGTAATCAGTTAGGTGTAAACCTTAAATCACTGGCGCATGCAGCCGAGAACTATCAGGTTGTTGTGGCTGAAAATCGAAAATTGTTCAATGAAATCCAAGAATTAAAAGGAAACATCAGAGTGTATTGTCGCATTAAACCATTTACTGCTGGGGCCAAAGAAAAACAGTCCATTATAGAACACATTGGAGAAGATAATTTGGTTGTGGCAAATCCCTCTAAGCAAGGGAAAGATGCTCTCCGGTCATTCAAATTCAACAAGGTTTTCGGGCCTGACGCAACTCAAGCGGATGTATACGCCGACATACAGGCACTTACAAGATCAGTTCTTGATGGATATAATGTATGCATATTTGCTTACGGTCAAACTGGTTCAGGGAAAACTTACACAATGACTGGTCCAACCGGAGCAACTAGCGAGAATCTTGGTGTTAATTATCGGGCTCTGAATGATCTTTTCAGACTTTCCACGAGTAGAACGAGCTCCATTGAGTATGAGATCGGAGTTCAAATGGTTGAGATATACAATGAGCAACCAGAAGGATTGGCAGTGCCTGATGCAAGCATGTTCCATGTTAATGCGCCTTCAGATGTGATTAAGCTAATGGACATTGGACTAAAAAATAGAGCCATAAGCGCTACTGCCATGAATGAAAGAAGTAGCCGTTCACACAGTGTGGTGACGATTCATGTTCGAGGGAAAGATTTGAACTCGGGTTCTACACTGGTTGGTAATCTTCATTTGGTGGATTTGGCAGGAAGCGAAAGGGTAGATCGGTCTGAAGTAACCGGAGATAGGCTTAGGGAGGCACAACATATAAACAAATCACTGTCTGCATTTGGAGATGTGATCTTTGCCCTCTCCCAAAAGAGCTCTCATGTGCCATATAGAAACAGCAAGCTCACTCAGCTACTCCAAGCTTCTCTTGGTGGTCACGCAAAGACGCTCATGTTTATCCAAATCAACTCCGACGTGAATTCGTATTCCGAAACAATGAGTACTCTCAAGTTTGCTGAAAGGGTTTCTGGAATTGAGTTAGGAGCTGCACGAAGTAATAAAGAGAGCAAGGATGTGAAAGAATTAATGGAACAGGTGGCTTCTCTGAAGAACAGTGTGTCGAAAAAAGACGAGGAGATTGAGCGGCTACAATTACTTCACTTTAAGCAACTCCAAAGACCAAGCACAAGCAGAAGTCCGAGGGATGAATCTCTCCGACGAACGAAATCCTCTATTGGAGGAGACAAAACTCCTCGGGAAAGCTGGAGTTACACAGATGCAGACTTTGATGAAAGATCCAACAATAATTCTGATTATGGTTATGGTTCTGAAAGCTCAAAATCATCAGATAAGATGGACAAACCGAAAACATTACAAAGAAGCGTTCAATCGATGAAGAAAGCATCAGTGCGAGTCCCATCTCCCACGAAAACACAAAGGGACCCTCCTAAGATGTCACCAGCTCCAGGTATAAGGAAAAGCGCCAGTATTGGCCACCTAAGACAACCAGGTTCAAAACGGTGGCAGTAA 2859 0.4229 MGSPKPISTGICKNGFIVSIHGEVEAKHRLLLVQWISTLLPSLNLPINITDDVLRACLRDGIVLCQILNKLRPGSVPVVSEFDHEENLKSFLKAMDALGLPQFSISDLEKGSMKVVVDCLLSLRAKSLQNVFWDNNSSTTNSKVGSPHGITAPSVPFPPSSETTTKHHRSLSSPFLTESPTSLLHQGHKFHEGYEVFQGKEESYADLSPTKISEMVKSVSLDNAPTQSLLGVVNGILEETVEKRNGEMPYRVACLLRKVSQELERRMSAQAEHSRTQSNLFKVREEKYQSRIRALEALAVGNNIEEDEAEKFAVEENKPDDRDFERSMKKQEDKILEISALTEDLETSKKALELKCSRLEVEAMEAKAEIEQKTKAYEQQLEEWRNKCKELESSYVSKYNEWNMKKNQMLNVVTFQSSKLEIMKLSWESIKQDVMQEQKVYAEECNQLGVNLKSLAHAAENYQVVVAENRKLFNEIQELKGNIRVYCRIKPFTAGAKEKQSIIEHIGEDNLVVANPSKQGKDALRSFKFNKVFGPDATQADVYADIQALTRSVLDGYNVCIFAYGQTGSGKTYTMTGPTGATSENLGVNYRALNDLFRLSTSRTSSIEYEIGVQMVEIYNEQPEGLAVPDASMFHVNAPSDVIKLMDIGLKNRAISATAMNERSSRSHSVVTIHVRGKDLNSGSTLVGNLHLVDLAGSERVDRSEVTGDRLREAQHINKSLSAFGDVIFALSQKSSHVPYRNSKLTQLLQASLGGHAKTLMFIQINSDVNSYSETMSTLKFAERVSGIELGAARSNKESKDVKELMEQVASLKNSVSKKDEEIERLQLLHFKQLQRPSTSRSPRDESLRRTKSSIGGDKTPRESWSYTDADFDERSNNNSDYGYGSESSKSSDKMDKPKTLQRSVQSMKKASVRVPSPTKTQRDPPKMSPAPGIRKSASIGHLRQPGSKRWQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02349 952 PRINTS Kinesin heavy chain signature 556 577 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g02349 952 PRINTS Kinesin heavy chain signature 689 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g02349 952 PRINTS Kinesin heavy chain signature 738 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g02349 952 PRINTS Kinesin heavy chain signature 658 675 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g02349 952 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 1 312 - -
Aip03g02349 952 MobiDBLite consensus disorder prediction 140 176 - -
Aip03g02349 952 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 312 - -
Aip03g02349 952 Pfam Kinesin motor domain 488 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g02349 952 MobiDBLite consensus disorder prediction 156 176 - -
Aip03g02349 952 PANTHER KINESIN-LIKE PROTEIN KLP-3 880 952 - -
Aip03g02349 952 Gene3D Kinesin motor domain 627 790 IPR036961 -
Aip03g02349 952 Gene3D Kinesin motor domain 424 626 IPR036961 -
Aip03g02349 952 Gene3D - 20 128 IPR036872 -
Aip03g02349 952 SMART kinesin_4 480 796 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g02349 952 Coils Coil 342 401 - -
Aip03g02349 952 MobiDBLite consensus disorder prediction 834 952 - -
Aip03g02349 952 CDD CH 32 128 IPR001715 GO:0005515
Aip03g02349 952 Pfam Calponin homology (CH) domain 31 124 IPR001715 GO:0005515
Aip03g02349 952 MobiDBLite consensus disorder prediction 842 857 - -
Aip03g02349 952 Coils Coil 795 829 - -
Aip03g02349 952 SUPERFAMILY Calponin-homology domain, CH-domain 24 124 IPR036872 -
Aip03g02349 952 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 328 834 - -
Aip03g02349 952 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 880 952 - -
Aip03g02349 952 ProSiteProfiles Calponin homology (CH) domain profile. 26 128 IPR001715 GO:0005515
Aip03g02349 952 SMART ch_5 28 126 IPR001715 GO:0005515
Aip03g02349 952 MobiDBLite consensus disorder prediction 901 924 - -
Aip03g02349 952 Gene3D - 321 362 - -
Aip03g02349 952 ProSiteProfiles Kinesin motor domain profile. 482 788 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g02349 952 PANTHER KINESIN-LIKE PROTEIN KLP-3 328 834 - -
Aip03g02349 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 826 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02349 Aip-Chr3 37171009 37175722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02349 371 822 Calmodulin-binding Proteins AT5G65930 34.454 5.12e-67 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02349 K10406 - sly:101267817 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02349 03 37171009 37175722 Aip05g03125 05 134749792 134758589 PCT