Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02310 ATGAAGAAGGAAAATCAAAACGTTTCCGTTGTAGCTGTCCTCACTGCATTGTTGTTTGCAGGCACATTGTCATCAGTGTGTGCCTCCAACTCCAAGCAAACAAGTTTCAGTGGCGAACTCAGCCATGTGGAAACCATGTACATCAAGCAGCGGCAGTTGCTCTACTACAGGGACGAGTTCGGTGACAGAGGAGAGAATGTCACTGTAGACCCTTCCCTGGTTTTTGAGAACCAGCGCATTAGGAACGCCTACATTGCCTTGCAAGCATGGAAGCAAGCCATTGTTTCCGATCCTCTGAACTTCACAGCAAACTGGGTAGGATCTGATGTGTGCAGCTACACTGGGGTCTACTGTGCACCCGCACTGGACAACCCTAAGATCCGCACCGTTGCTGGCATTGATCTGAACCATGCGGATATTGCTGGCTACTTACCGGAAGAGCTTGGTCTCTTGGTGGATCTTGCTCTCTTCCATATTAACTCAAACAGGTTCTGTGGCACATTACCGCACCGCTTCGATAGGCTCAAGCTCTTGTTCGAATTGGATCTCAGTAACAACCGCTTCGCCGGCAAGTTCCCTGCTGTCGTATTGAGACTCCCAACCCTCAAGTTCTTGGATCTGAGGTTCAACGAGTTCGAAGGTGGGGTTCCCAGAGAGCTCTTTGACAAAGATCTTGACGCCATTTTCATCAATCACAACAGGTTCGTCTTTGAAATTCCTGATAACTTGGGAAACTCGCCGGTTTCCGTTATTGTGTTGGCCAACAACAGGTTCCACGGTTGCATCCCTGCCAGCATTGGGAACATGTCGAACCTCAACGAGATCATTCTCATGAACAATGAGCTCAGAGCGTGCTTGCCTTCCGAGATTGGCTTGTTGAAGAACCTCACAGTCTTTGATATCAGCTTCAACCAGCTCTTGGGACCATTGCCGGACGCCATTGGAGGAGCTGTGAGCTTGGAGCAGTTAGACGTAGCGCACAACTTGCTCTCTGGGAACATTCCGGCCAGTATTTGCATGCTGCCACATCTTCAGAACTTCACTTATTCTTATAACTTCTTCACAGGGGAGCCGCCGGCGTGCCTGAGGCTGGCATCGTTTGATGACCGGACGAACTGCTTGCCGGGAAGGCCGTTGCAGAGATCCGCGGCCCAATGTAGGTCGTTCTTGTCTAAACCTGTGGACTGTAACTCGTTTGGATGCAAGCCATTTGTTCCTTCCCCTTCACATCCTTCGCCTCCTTCTTCACCTTCTTCACCTTCACCCTCACCCTCTTCACCGCCTTCTATTCCTTCACCTTCTCTGCCTTCTCCCTCTTCGCCACCGTCTACCCCTTCGCCTTCTCCCCCCAATGCACCTGGACAAGCTCCTCCTCCATCAACTCCTACTCCCATACCTTCTCCACCTAGAAGCGAACCTTCCCCAATTTATAGCACCGCGACCACATCATCCACCGGTCCACTATATTCACCACCACCACCAACGCCTGTTCATTATAGTTCTCCGCCGCCACCAGCATCATCACCACCCTGCGAAGAAACTCCACCATCTCCGACCCCTTCCCCACCACCATCCCCTGTATATGAAGGGCCATTGCCACCTGTCGTCGGAGTCCCGTACTCTTCGCCTCCACCACCACCTTTCTATTAA 1650 0.5152 MKKENQNVSVVAVLTALLFAGTLSSVCASNSKQTSFSGELSHVETMYIKQRQLLYYRDEFGDRGENVTVDPSLVFENQRIRNAYIALQAWKQAIVSDPLNFTANWVGSDVCSYTGVYCAPALDNPKIRTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCGTLPHRFDRLKLLFELDLSNNRFAGKFPAVVLRLPTLKFLDLRFNEFEGGVPRELFDKDLDAIFINHNRFVFEIPDNLGNSPVSVIVLANNRFHGCIPASIGNMSNLNEIILMNNELRACLPSEIGLLKNLTVFDISFNQLLGPLPDAIGGAVSLEQLDVAHNLLSGNIPASICMLPHLQNFTYSYNFFTGEPPACLRLASFDDRTNCLPGRPLQRSAAQCRSFLSKPVDCNSFGCKPFVPSPSHPSPPSSPSSPSPSPSSPPSIPSPSLPSPSSPPSTPSPSPPNAPGQAPPPSTPTPIPSPPRSEPSPIYSTATTSSTGPLYSPPPPTPVHYSSPPPPASSPPCEETPPSPTPSPPPSPVYEGPLPPVVGVPYSSPPPPPFY 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02310 549 MobiDBLite consensus disorder prediction 407 473 - -
Aip03g02310 549 MobiDBLite consensus disorder prediction 487 549 - -
Aip03g02310 549 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 448 - -
Aip03g02310 549 Gene3D Ribonuclease Inhibitor 248 391 IPR032675 -
Aip03g02310 549 MobiDBLite consensus disorder prediction 407 549 - -
Aip03g02310 549 Gene3D Ribonuclease Inhibitor 83 247 IPR032675 -
Aip03g02310 549 SUPERFAMILY L domain-like 83 364 - -
Aip03g02310 549 PRINTS Proline rich extensin signature 437 454 - -
Aip03g02310 549 PRINTS Proline rich extensin signature 399 420 - -
Aip03g02310 549 PRINTS Proline rich extensin signature 457 482 - -
Aip03g02310 549 PRINTS Proline rich extensin signature 420 436 - -
Aip03g02310 549 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 11 448 - -
Aip03g02310 549 Pfam Leucine rich repeat N-terminal domain 86 118 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02310 Aip-Chr3 36044339 36046076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02310 2 401 Trihelix Transcription Factor Family AT4G18670 74.065 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02310 - - gmx:100814585 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02310 03 36044339 36046076 Aip03g02310 03 36044339 36046076 ECH