Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02309 ATGATGGATTATAGCAATTGCTACCCGGAAGATCCACATGCAGTGAACTTTGCTGGTCAGAGAGGATTTCTGAAAGTATTGAAATCAGGATTCAAAGAAACATTGTTCCCTGACGATCCCTTCAGGGAGATTAAGAAAGAGGAGAAGCCATTGTTTAGAGCTATAAAATGGCTTCAGTACTTGGTTCCAATCTTCCAGTGGCTCCCGACATACACTTGGCGCTTGTTCATCTCCGACTTCTTCGCCGGCATCACCGCCACCAGTATCGCCGTTCCCCAAGCCATCAGCTATGCAAAACTTGCTGATCTTCATCCCATTATTGGCCTATATACATGTTTTGTGCCACCTATTGTGTATGCTATATTTGGGAGCTCAAGGCATTTATCAGTGGGGCCAATTGCATCAGCATCATTGCTTATATCTCAAACTATTTCAACCGTGGTAAGGCCAGAAGAAGACCCCATATTGTATCTTCACTTGGTTTTGACAACTACGTTTGTTGCTGGCCTCTTCCAAACTTGTTTGGGTTTCCTCAGGTTGGGTATATTAGTAGATTTATTATCGCATTCAACCATCACAGGTTTCATGGGAGGGGCAGCAGTAATGCTTACCCTCCAACAGCTGAAGGGCATTTTCGGCTTGAAACATTTTGCACATAAAACTGGCGTCACAACTGTGCTCAAGTCCATATGGACCTATAGACATGAGGCACCCATGGCTCCCATGACAACTGTAATAGTCGGTGGCGTCTTTACTTACCTGGTCAATGGAAAACGACATGGAATTCAAACTGTGGGTCACCTGAGTAGAGGAATAAATCCTCTTACCATCAAATACTTGAAATTTGACAGCAAATATTTAGCACCGGTGCTGAGAGCAGGTTTTATCACGGGTATTTTGTCCATGGCGGAGGGCATAGCAATAGGAAGAAGCTTTGCTGTGGTTGAAAACACGCCTCATGACGGGAACAAAGAGATGATAGCTTTTGGTCTTATGAACATGTGTGGTTCTGTTACTTCATGTTACTTGACTACTGGACCATTTTCGAAAACGGCAGTGAATTACATTGCAGGGTGTAAGACTGCGATGTCAAACTTAGTACAAGCATTCCTAGTAGCACTCACTCTTGAGTTTTTGGCTCCTCTTTTTGGTTATACACCTCTTGTTGTTCTATCAGCTATCATCATCTCTGCAGTGCTGGGCTTCCTTAATTATGCTGAAGTTGTTCATCTTTATAAAGTTGACAAGTTTGATTTCATTATTTGCATGGCTGGTTTCGTTGGAGTAATCTTCGTAGCCTTGGACATTGGTCTCATGATCTCTGTGGGTCTTAGCATTCTTAGAGCACTATTATATGTGGCAAGGCCCGATTCATGTAAGCTTGGAAAGTTACCTGACTTGGGTTGCTATCGAGATACTGATCAATATACAGTTTCAACACTCCCAGGAATTCTAATTGTTCAACTTGGTTCTCCCATGTATTTTGCGAATTCTAATTATGTCAAAGAAAGAATTATGAGGTACATTCGATGTGAAGAAGACTCTACTGGAATTACTGTTGAGCAGATCATACTGGATTTGTCAGGAGTGACATCCATTGACACCACTTCTCTTGAAGGATTATGGGAAACAAATAAAACCATTGAAAATAATGGAATGCAGTTGTCATTTGTGAACCCAAGGATAGAGGTATTAGAGAAAATGGTGGCAGCCAAATTTGTTTCGAGGGTTGGAAAAGAATCATTTTTCCTTACAGTAGAGGATGCAGTGAAGGCAAGTCAAATAGCACTTCGCAAATCGAGGGCAAGTAATTCTGAAGATGGAGTTAGAGGAACAACAATTCATCAATCTGCAGTTGATTCTTGCTAG 1869 0.4184 MMDYSNCYPEDPHAVNFAGQRGFLKVLKSGFKETLFPDDPFREIKKEEKPLFRAIKWLQYLVPIFQWLPTYTWRLFISDFFAGITATSIAVPQAISYAKLADLHPIIGLYTCFVPPIVYAIFGSSRHLSVGPIASASLLISQTISTVVRPEEDPILYLHLVLTTTFVAGLFQTCLGFLRLGILVDLLSHSTITGFMGGAAVMLTLQQLKGIFGLKHFAHKTGVTTVLKSIWTYRHEAPMAPMTTVIVGGVFTYLVNGKRHGIQTVGHLSRGINPLTIKYLKFDSKYLAPVLRAGFITGILSMAEGIAIGRSFAVVENTPHDGNKEMIAFGLMNMCGSVTSCYLTTGPFSKTAVNYIAGCKTAMSNLVQAFLVALTLEFLAPLFGYTPLVVLSAIIISAVLGFLNYAEVVHLYKVDKFDFIICMAGFVGVIFVALDIGLMISVGLSILRALLYVARPDSCKLGKLPDLGCYRDTDQYTVSTLPGILIVQLGSPMYFANSNYVKERIMRYIRCEEDSTGITVEQIILDLSGVTSIDTTSLEGLWETNKTIENNGMQLSFVNPRIEVLEKMVAAKFVSRVGKESFFLTVEDAVKASQIALRKSRASNSEDGVRGTTIHQSAVDSC 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02309 622 ProSiteProfiles STAS domain profile. 474 593 IPR002645 -
Aip03g02309 622 Gene3D STAS domain 455 596 IPR036513 -
Aip03g02309 622 PANTHER SULFATE TRANSPORTER 3.5-RELATED 11 236 IPR030316 GO:1902358
Aip03g02309 622 PANTHER SULFATE TRANSPORTER 3.5-RELATED 239 603 IPR030316 GO:1902358
Aip03g02309 622 PANTHER SULFATE TRANSPORTER 11 236 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip03g02309 622 PANTHER SULFATE TRANSPORTER 239 603 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip03g02309 622 CDD STAS_SulP_like_sulfate_transporter 482 586 - -
Aip03g02309 622 Pfam Sulfate permease family 239 424 IPR011547 GO:0016021
Aip03g02309 622 Pfam Sulfate permease family 76 236 IPR011547 GO:0016021
Aip03g02309 622 Pfam STAS domain 476 589 IPR002645 -
Aip03g02309 622 SUPERFAMILY SpoIIaa-like 476 592 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02309 Aip-Chr3 35986884 35990725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02309 13 601 Inorganic Solute Cotransporters AT5G19600 54.984 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02309 K17471 - gmx:100789107 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02309 03 35986884 35990725 Aip03g02309 03 35986884 35990725 ECH