Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02307 ATGGTTGATAATGGTGTCTCTGATTCCTTATTCAAGATGCCCACCATCAAGTTTACTAAGCTCTTCATCAATGGACACTTTGTTGATTCCATATCAGGGAAGACATTTGAGACAATAGATCCGAGAACAGGAGAGGTAATAGTGAAGATCAGTGAGGGAACTAAAGAAGACATTGATGCTGCTGTTGCAGCGGCGCGTGAGGCATTTGACACTGGTCCATGGCCCCGCATGACCGGAGTTGAAAGAGCAAAAATTATGGTGAAATGGGCAGAGCTTATTGAAGAAAATGGAGAAGAATTAGCGGCATTGGACACCATTGAAGCTGGTTTGCTATACCAATTAACCAAGTTTGGGATTCCCGCAGCAGCGGATATGTTGCGGTACTATGCTGGTGCTGCTGACAAGATTCATGGGGAGGTATTGAAGAGTTCTGGACAGTTCCATGCATACACATTAATGGAACCAATTGGTGTTGTTGGACACATCATCCCTTGGAATGTTCCTCTTATGATGTTCTTCACCAAGGTTGCACCTTCCATTGCAGCTGGCTGCACCATGGTCCTCAAACCCGCTGAACAGACCCCTCTCTCTGCTTTATTTGTTGCTCATCTAGCTAAGCTGGCTGGAGTTCCGGATGGAGTGCTTAATGTAGTACCGGGATTCGGTCCGACTGCAGGTGCTGCAATAAGCTCACACATGGAGATTGATAAGGTTAGCTTTACCGGTTCAGTTGAAACAGGGCGTGAAGTGATGCATGCGGCAGCTAGTAGCAATTTGAAGGCGGTTTCACTTGAATTAGGTGGCAAGTCTCCCCTCATTATTTTTGATGATGCTGATCTTGACAAAGCCGCTGACCTTGCATTCTTCGGCATGTTCTTGAACAAGGGAGAAATATGTGCTGCTGGTTCTCGTGTGTACGTTCAGGAAGGGATCTATGATGAGCTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTAAAACCAACCAAGGACCTCAGGCTGACAAGAACCAATTTGATAAAATTCTTTCCTACATTGAGCATGGAAAGAAAGAGGGAGCTACTCTTTTGACCGGGGGTAAATCCATCGGCACCAAGGGCTACTTCATTGAACCTACAATTTTCTCTCATGTAAAGGAGGACATGCGTATAACTCAGGATGAAATATTTGGCCCCGTGATGACGTTAATGAAGTTTAAGACAATTGAGGAAGCCATTAAGAGGGCAAACAATACAAGATACGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCAAGGTCCATTCGCGCAGGCATTGTTTGGATCAATTGCTATTTGATTCTTGAGAGTGACATTCCTTTTGGAGGGTACAAGATAAGTGGATTTGGTGGAAAAGATCTCGGTTTGAATGCACTTCACAAGTACTTGCAACTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCATTGA 1500 0.4453 MVDNGVSDSLFKMPTIKFTKLFINGHFVDSISGKTFETIDPRTGEVIVKISEGTKEDIDAAVAAAREAFDTGPWPRMTGVERAKIMVKWAELIEENGEELAALDTIEAGLLYQLTKFGIPAAADMLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNVPLMMFFTKVAPSIAAGCTMVLKPAEQTPLSALFVAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMEIDKVSFTGSVETGREVMHAAASSNLKAVSLELGGKSPLIIFDDADLDKAADLAFFGMFLNKGEICAAGSRVYVQEGIYDELEKKLVEKAKAWVVGDPFDPKTNQGPQADKNQFDKILSYIEHGKKEGATLLTGGKSIGTKGYFIEPTIFSHVKEDMRITQDEIFGPVMTLMKFKTIEEAIKRANNTRYGLAAGIVTKNIDTANTMSRSIRAGIVWINCYLILESDIPFGGYKISGFGGKDLGLNALHKYLQLKSVVTPIYNSPWH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02307 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 264 271 IPR029510 GO:0016491
Aip03g02307 499 SUPERFAMILY ALDH-like 11 495 IPR016161 GO:0016491
Aip03g02307 499 Pfam Aldehyde dehydrogenase family 28 489 IPR015590 GO:0016491
Aip03g02307 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 292 303 IPR016160 GO:0016491
Aip03g02307 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 268 457 IPR016163 GO:0016620
Aip03g02307 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 498 - -
Aip03g02307 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Aip03g02307 499 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 7 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02307 Aip-Chr3 35939180 35951236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02307 12 498 Aldehyde Dehydrogenase Gene Family AT3G24503 70.552 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02307 K12355 - gmx:100783920 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02307 03 35939180 35951236 Aip05g03198 05 136350994 136359884 PCT