Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02306 ATGACTGAACTCACTAATAATGGCCGTGACTGCTCTTCCGTCACCGTCAAGTTCACCAAGCTATTCATTAATGGGCAGTTTCTTGATTCAGTTTCAGGGAAGACATTTGAGACAATAGATCCAAGAACAGGAGAGGTGATAACAAGAATTAGCGAGGGAACCAGAGAAGACATAGATATTGCTGTTAAGGCTGCACGCCACGCATTTGACTTTGGTCCATGGCCTCGCATGCCTCCCTCTGAGAGAGCAAAGATTATGATGAAATGGGCAGAACTAATTGATGAAAACGTGGAAGAACTTGCGGCACTAGATACTATTGATGCTGGAAAATTGTATCATATGTGCAAGGCTGTGGACATTCCTACAGCATCAAACACTCTACGCTACTATGCTGGTGCTGCTGACAAAATCCATGGGGAGGTGTTAAAGATGTCTGGGAAGTTCCATGCATACACATTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCATGGAATTTCCCAACCACCATGTTCTTCCTTAAAGTTAGCCCTTCCTTGGCTGCAGGCTGCACCATGGTACTCAAGCCTGCAGAGCAGACACCACTCTCTGCTCTGTTTTATGCTCATCTAGCCAAACTGGCTGGAGTTCCGGATGGAGTGCTTAATGTAGTTCCCGGATTCGGTCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAAGTTAGCTTCACAGGTTCAACAGAAGTAGGGCGTGAAATAATGCAAGCTGCAGCAAAGAGCAACTTGAAACAAGTGTCACTTGAATTAGGAGGAAAATCACCTCTCATTATCTTTGATGATGCTGATATTGACAAAGCTGCTGACCTTGCTCTCTTGGGCATCCTATTTAACAAGGGAGAAGTCTGTGTTGCAAGTTCGCGTGTGTTTGTTCAGGAAGGTATCTACAATGAATTTGAAAAGAAGCTGGTAGAGAAGGCAAAAGCATGGGTTGTTGGGGATCCTTTTGACCCTAAATCTCAGCAAGGACCGCAGGTTGACAAGAACCAATTTGAAAAAGTCCTTTCCTACATTGAACATGGAAAGAGACAAGGTGCTACCCTGTTGACTGGGGGTAAAACACTGGGCAACAAGGGCTATTACATTCAACCAACAATTTTTTCTGATGTGAAGGAGGATATGCTTATAGCACAAGATGAAATATTTGGCCCTGTCATGGCACTCAAGAAGTTCAGGACGATTGAGGAAGCAATTAAGAGTGCAAACAACACAAGATATGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCACGGTCCATTCGTGCAGGGACTATTTGGATCAATTGCTACTTTGCGTTTGGGGATGATGTTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAAAGATTCCGGATTGGATGCACTTCACAAATACCTACAAGTTAAATCTGTTGTCACACCTATTTACGATTCTCCTTGGCTTTGA 1500 0.4387 MTELTNNGRDCSSVTVKFTKLFINGQFLDSVSGKTFETIDPRTGEVITRISEGTREDIDIAVKAARHAFDFGPWPRMPPSERAKIMMKWAELIDENVEELAALDTIDAGKLYHMCKAVDIPTASNTLRYYAGAADKIHGEVLKMSGKFHAYTLMEPIGVVGHIIPWNFPTTMFFLKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAADLALLGILFNKGEVCVASSRVFVQEGIYNEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKNQFEKVLSYIEHGKRQGATLLTGGKTLGNKGYYIQPTIFSDVKEDMLIAQDEIFGPVMALKKFRTIEEAIKSANNTRYGLAAGIVTKNIDTANTMSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDSGLDALHKYLQVKSVVTPIYDSPWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02306 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Aip03g02306 499 SUPERFAMILY ALDH-like 14 495 IPR016161 GO:0016491
Aip03g02306 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Aip03g02306 499 Pfam Aldehyde dehydrogenase family 30 489 IPR015590 GO:0016491
Aip03g02306 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Aip03g02306 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Aip03g02306 499 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 13 499 - -
Aip03g02306 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02306 Aip-Chr3 35916628 35930952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02306 7 499 Aldehyde Dehydrogenase Gene Family AT3G24503 70.400 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02306 K12355 - gmx:100811540 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02306 03 35916628 35930952 Aip05g03205 05 136541563 136556662 PCT