LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g02292	ATGCAGAGTGCCTTGGTTTCGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCACAGCCTATTGCAGGTTTCATACACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGCTAAACTTGAGCATTGGTGGACCTGATTATTTGGATCTTCCATTTGTTGAGAAGATATGGGAAATAACAGCAAATAATATAATCATGGTCTCTGCAATTGGAAATGATGGACCGCTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTTATTGGCGTTGGTGGCATTGACTATAGTGACCATATTGCTTCATTTTCCTCACGTGGCATGAGTACTTGGGAACTTCCTCATGGTTATGGTCGTGTGAAGCCAGACATAGTTGCATACGGACGGGATATAATGGGATCCAAGATTAGCAAGGGTTGCAAAAGCTTATCAGGAACAAGTGTAGCAAGTCCTGTAGTTGCCGGTGTTGTGTGCTTGCTTGTAAGTATCATCCCTGCATCCAATCGAAAAGACATCTTAAACCCAGCAAGTATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTCTCTGGGCCTAACATGTTTGAGCAAGGTGCTGGCCGAGTTGATTTGCTCGAATCATATGGGATTCTTAAGAGCTACAAGCCTAGGGCAAGTATCTTCCCCAACATCCTTGATTATACAGATTGTCCTTATACATGGCCTTTTTGTCGCCAACCACTCTATGCAGGATCTATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTTATTGGCTATGTCGAAGGCCCACCAACATGGCATCCTTCTGATGAGGTGGGGAATCTTTTAAGCATTCATTTTACACATTCAGAGATTATCTGGCCTTGGACTGGTTATTTAGCACTTCACATGCAAATCAAGGAAGAAGGTGCCCAGTTTTCTGGAATTATTGAAGGCAATGTAACCCTTACAGTTTCTAGCCCACCTGCTCAAGGAGAGAGCCCTCAAACTAGCATTTGTGTGCTTCAATTGAAGTTGAAAGTGGTACCGACGCCACCTCGATCCAAACGAATTTTGTGGGATCAGTTTCATAGTATTAAATACCCACCTGGTTACATTCCGAGAGATTCGTTGGATGTTCGAAATGATATTCTTGACTGGCATGGTGATCATCTGCATACGAATTTTCACATTATGTTCAACATGTTAAGAGATGCTGATTATTATGTTGAAACACTTGGATCTCCTCTTACATGCTTTGATGCTCGTCAATATGGAACACTTTTGATGGTAGATCTTGAAGATGAGTACTTCCCCGAGGAGATTGAGAAACTTAGAGATGATGTCATGTATACTGGATTGGGGCTAGCCATCTTTGCAGAGTGGTATAATGTAGATACTATGGTGAAGATGAGATTCTTTGATGACAATACACGAAGTTGGTGGACCCCTGTTACTGGAGGATCAAATATTCCAGCACTGAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGACAAGATCCTGAATGGTGATTTTTCGCTTTTAGGCGAGCAAAGCCGATATGCTTCTGGAACAAATATTGTGAGGTTTCCTAGAGGTGGCCATGTACATAGCTTTCCCTTCTTGGATAGTTCCGAGAGTGGAGCCACTCAGAACGTGCTGTTGAATTCTGAAACCAAACCCGACTCTCCAATTCTTGGTTTCACAGAGATGGGTGAAGGTCGTGTAGCTGTTTACGGTGATTCTAATTGTTTGGACAGTAGCCATATGGTCACTAATTGTTACTGGCTCCTAAAGAAAATGCTTGATTTTACTAGTACAGATGCAAGGGATCCTGTGCTGTTCTCCAATTCAGTTAAACTAGACATTTCGTTGTACGAAGATGATAATCAATTGCCATCTCGGAGAACTGATGTCAATTTCTCAACATATTCGGCGGTTGTGGGAAAGGATTTGATTTGCCGAACTGACACAAGATTTGAAGTATGGGGAACCAAGGGCTACAGTCTGCAGCTTCAAGGAAGAACAAAAAAGTTGCCTGGTTATCCTCTCATTGATTTGGGAAGAGGGTTGAACTCAACTCTGGCTACTTCTACTAGAAGGAATCGAATATTTAACACACGGAACAAGGGTGACTCCGTTGGGAATACGTACTTGGGCCTATTCTATGGAGATGAGCTTGATGCACCTAAGCTTGTTGGTATTAACTGGCTTGTACCAGCTGTAGTTGCAGCAACGGGTTTTCTGCTATTATGTTTTTGGCGCATTCGCCAAAAGCGACGGCGGCGAAGGAAAGGATCAGGCGCTGGCAGATTGGCCAACTTATTATAG	2361	0.4286	MQSALVSHQIQRFMHFVCSLMHSLLQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISKGCKSLSGTSVASPVVAGVVCLLVSIIPASNRKDILNPASMKQALVEGAAKLSGPNMFEQGAGRVDLLESYGILKSYKPRASIFPNILDYTDCPYTWPFCRQPLYAGSMPVIFNATILNGMGVIGYVEGPPTWHPSDEVGNLLSIHFTHSEIIWPWTGYLALHMQIKEEGAQFSGIIEGNVTLTVSSPPAQGESPQTSICVLQLKLKVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDADYYVETLGSPLTCFDARQYGTLLMVDLEDEYFPEEIEKLRDDVMYTGLGLAIFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGSNIPALNDLLAPFGIAFGDKILNGDFSLLGEQSRYASGTNIVRFPRGGHVHSFPFLDSSESGATQNVLLNSETKPDSPILGFTEMGEGRVAVYGDSNCLDSSHMVTNCYWLLKKMLDFTSTDARDPVLFSNSVKLDISLYEDDNQLPSRRTDVNFSTYSAVVGKDLICRTDTRFEVWGTKGYSLQLQGRTKKLPGYPLIDLGRGLNSTLATSTRRNRIFNTRNKGDSVGNTYLGLFYGDELDAPKLVGINWLVPAVVAATGFLLLCFWRIRQKRRRRRKGSGAGRLANLL	786

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g02292	786	Gene3D	Peptidase S8/S53 domain	17	228	IPR036852	GO:0004252\|GO:0006508
	Aip03g02292	786	Pfam	Subtilase family	29	209	IPR000209	GO:0006508\|GO:0008236
	Aip03g02292	786	SUPERFAMILY	Subtilisin-like	27	215	IPR036852	GO:0004252\|GO:0006508
	Aip03g02292	786	PANTHER	PEPTIDASE S8	538	697	-	-
	Aip03g02292	786	PANTHER	PEPTIDASE S8	26	508	-	-
	Aip03g02292	786	PANTHER	MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE	538	697	-	-
	Aip03g02292	786	PANTHER	MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE	26	508	-	-
	Aip03g02292	786	ProSitePatterns	Serine proteases, subtilase family, serine active site.	156	166	IPR023828	-
	Aip03g02292	786	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	222	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g02292	1	783	Subtilisin-like Serine Gene Family	AT5G19660	78.680	0.0	1258

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g02292	K08653		-	gmx:100797547	1345.49

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g02292	03	35550747	35556229	Aip03g02292	03	35550747	35556229	ECH