Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02286 ATGGAAGGTGGTCGCAACACACGAGTCAATGCTTCTAATGAGGGTTTCGTCGAACGGCTGCAAAGCTTTGGTAGAGAGAGGGAGCAGAGCAAGCAAGAGGGGAGGGCGAAGCCGAACATCAAAAAGTATTTATATGTGATGGGGGAAGGAGAAGGAGGTGATTGCGCTTTGAGAAATGTGGCATCGGATGCACCTACGGTGCCGGTGCTGGTGCCGCCGTCGGATATTCCCGCCAAGAAGCTTGCAAGGCAGCTTGATTTCACCGGCTTAGCCGGGATGCCGGGCGGCGCGCCATTTCCAGAGAACTCGCAGTTGCGGCAGCAACAGCAACAACAGCTTCAGCCGCAAGTGGTGGCACAGTCACAGTCACGGTCACATCCGCAGACAATGACGCAGCCGATGGTAATGATGCCGATGCCGCATCCGCCGCAGGCGCCACGCCTTTCAACGAGGGTTGGTAAATCAGAATCTCCAAAACCAAGATCAAGGACCAATTTTGAAACAAAAGAAGCTACTCCAAAGAAGCAAAAGCAATGCAATTGTAAACACTCAAAGTGCTTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATACTGTGATGGTTGCAACTGTGTAAATTGTTACAACAATGTTGATAATGAAGCAGCCAGACGAGAAGCTGTTGGAGCTACCTTAGAACGTAATCCAAATGCATTTAGGCCAAAGATTGCGAGCAGCCCTCATGGACCACATGACAACAGGGAGGATGCTGGCGAAGTTGTTATATTGGGAAAGCACAATAAGGGATGTCATTGTAAAAAGTCTGGCTGCCTCAAGAAGTACTGCGAGTGTTTCCAAGCCAACATTCTTTGTTCCGAAAATTGTAAATGCATGGATTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAAGCATTGTTCCATGGAGATCAAAATATCAACATGACATATATTCAGCAAGCAGCAAATGCTGCAATAACTGGTGCTATCGGTTCCTCTGGCTTTTCATCACCGCCAGTATCAAAGAAAAGAAAAGGTCAGGAACTCTCTTTTGTGCCAACAGCCAAGGATCCATCCATTGGAAAGCTAGGAAAACAGGCAAACCATGTCAAAGGTCCTTTACCCTCCTCCTCCTTTTCTCCTGCCCCTAGTACTCATGTTGGAACTGCAACATTAGGTCCTTCAAAATTTATATACCGGTCTGTATTGGCAGACATACTACAACCAGAGCACTTGAAGGAGCTTTGTTCAGTCCTAGTGCTACTATCTGGACAAGCCGCGAAGACAGTAACAGACCAGAAAAATATAATGCACAAACATATAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAACAACAGTTACCAAGCCAAAAGGGAACTAATGTTGAGAAAGCTACGTCTGGTGATTGTTCAAGTGAGAACCGAATAGATAAGGTCAGCCCAGATAATTCTAGTTCAGACGGTGTTGGTGTCCTCAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTAATGTGCGATGAGCATGATACAATGTTTATGACTGCTGTCTCTCCTAGTGAGCCAATTTCTCACACTTGTAACATATCTTCTCAATTGCCTTGTGGACAAAAAATGACTGAGTTATATGCAGAGCAAGAAAAGATTGTTTTGACAAAGTTCAGAGATTTTCTTAATAGAGTTATCACTATGGGAGAAATAAATGAAACAAAATATTCTTCATTAGCCAGAAGTGAATTGGAGAGTCATAGGGACCCAGTGGTCAATGGCACTGAAAATGCTAGAACTGAGACAGTAGATGAAGGAGCCACTAAAATTGGTGTTGCCAAAGCTGTTGTTCATCCTCTGGCGACAAAAAATACCATTAGAAGTATTTTGAGGGCTTTTCTGGGCTTTGTTCATTTCTCCACAGTCGCCGGCGTCGCTCGCTGTCGTCGTCGCCTCATTTCTGCTCGCGGTCGCCGTCCCGCACTTGACTCTTTTGCAGCAAGACTTTCAGGGCTGCAGTTGCACTCCTTGTCCTTTTCTGGGCCCTTGCCAAAAAATCAAATCCATCTTTCTCCCTTCTTCTCTTTCCCAAGACTTCATCTATGCATTGCAGGTTCTTCATCCTTTGCTGATGGTCATTGGGTTTATTCTGTTAAGTGGAGAAGATGGTTGCCTGGTTCTATGGAATTGAAAAAAATAGTGCATTTAGGGCTTCAAGGTGTGGCTCTAGCTTTGGAATATTTGGAATTCCGACTAAATTTAAGGAAAATGATGGAATTGTGGCTAATTTCTACAGCCTTCATTCATGAATTGGGTTTGATTTGCATTTCCCTCTTTGGAACACAGtcacttgaccgttccttgaccggttcaattctcccaatcttCGTTATCACCTTCAAAGCTCGGAGAGCACGTGTTTCTTCACATCATCAAACCGGGCCTGGCTACTCTTCGGTCAAATCTCTAGTTGAAACACCAACCAGAAACTCAGTGAAAGCTGACACTGACACCAGATTCAATAGGAGAACACGTGGTTACAGAGACAGAACCGCTTCTTCTTCCTCTACCTTGAGTGATAGTAGTAGTGGCAGACAAGCGGTTACTGAGAGATGGCAGAAGAAGGAGAAGGAGAAGGAGAATCTGGTGAACATGACGGAGGAGGAGAAGGACAAGAAGAATAAGAAGAAGAGGAAGAAGAAAGATGAAGATTCGGCAGAGTTGAAGTTGCGGGTTGCTCTTGATATGTGCTCCAAAAGAGGGGATGTGATGGGAGCATTGTCCTTATATGACTCAGCTCTTGCTAAAGGGGTCAAGTTGGGCCAGCACCATTACACCGTTCTCTTGTATCTTTGTTCTTCTGCTGCTGTTGGTGTTGTTCGACCCGCTAAAAGTGGAACCGGTTCTCGAACTTTGAATGCATTGCTTTCATCAGCCACTGAAGCTGCCAATGTTTCAGCAGACTTGAATTATGCTTCAGACAGTGAAGTCTTGGTGTCAGCTTTGAATTCTGCTGAGAAATCAGCAAACCCTTTTGCAAAAGATGGTTCTAGCTCTAGCAGACAAGAAGATCATGGAATTATGGTTAGTGAGGATGTCAAGAAATATGCACTGCAGAGAGGGTTCGAAATATATGATAGTATGTGTTTGGATAAGGTCCAAGTGAATGAAGCTGCATTGACATCTGTGGCTAGAATGGCCATGTCCATGGGAGATGGTGATAGGGCTTTTGAGATGGTGAAGCAGATGAAGATCATGGGGATAAATCCTCGGTTACGGTCTTATGGTCCTGCTCTATCTACCTATTGCAGTAATGGAGAAATAGATAAAGCATTTGATGTTGAAAAGCACATGCTTGACCATGGCGTCTACCCTGAAGAGCCTGAATTGGAGGCACTCTTAAGGGTAAGCGTACAAGCCGGCAAGGGTGACAAGGTATACTATGTGTTGCATAAACTAAGAAGTAGTGTAAGGAAAGTCTCACCTTCTACTGCATCTTTGATTGTTGATTGGTTTAAGGGTAGGCAGGCTTCTAGATTAGGGAAAAGAAGATGGGATATAGGATCAATAAAGGAAGCAATGGAAAATAGTGGTGGAGGTTGGCATGGACAAGGTTGGTTGGGAAAAGGAAAATGGGAAGTTTCTCATACAACAATTGGAGATGATGGAATGTGTAAATGCTGTGGAGTGCACTTAGCCACTATTGATCTTGATCCTATTGAAACTGAGAATTTTGCTAAGTCAGTGGCATCCATTGCTGTGATGAGGGAGAAAAAGTTGAACTTTCAGAAATTTCAAGCCTGGCTTGACTACCATGGACCTTTTGAAGCAGTAGTAGATGCTGCAAATGTAGGTCTATTCCGTCAAAGGAAATTCAAGCCATCCATGGTCAATGCTGTTGTTAATGGAATACGGCAAAAGCTCCCTTCAAGAAAATTTCCCCTTATTATTTTGCATCATCGTCGTATCAAAGGAGAGAAAATGGGTGAACCAATCAACAGGGCGCTAATTGATAGGTGGAACAATGCTGATGCACTCTATGCAACACCTACAGGATCAAATGATGACTGGTATTGGTTGTATGCAGCTATAAAATTTAAATGCTTACTTGTTACAAACGATGAGATGAGAGATCATCTATTTCAGCTTCTGGGAAATGATTTCTTCCCCAAGTGGAAAGAGAGGCATCAGGTACGGTTCAGTTTCACTGATTCTGGTCCGCAGTTTCACATGCCGCCTCCTTGTTCCGTTGTAATTCAGGAATCAGAGCAAGGCCACTGGCATGTTCCAATTGAGACAGAAATTAACTATGAATCGGAGAGAAGATGGTTGTGCATTACCCGCTCGACCTCAGGCATGGTTTGTGAAGATTCTTCAACGGCTACTGGAAATAACTGA 4395 0.4366 MEGGRNTRVNASNEGFVERLQSFGREREQSKQEGRAKPNIKKYLYVMGEGEGGDCALRNVASDAPTVPVLVPPSDIPAKKLARQLDFTGLAGMPGGAPFPENSQLRQQQQQQLQPQVVAQSQSRSHPQTMTQPMVMMPMPHPPQAPRLSTRVGKSESPKPRSRTNFETKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVDNEAARREAVGATLERNPNAFRPKIASSPHGPHDNREDAGEVVILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNINMTYIQQAANAAITGAIGSSGFSSPPVSKKRKGQELSFVPTAKDPSIGKLGKQANHVKGPLPSSSFSPAPSTHVGTATLGPSKFIYRSVLADILQPEHLKELCSVLVLLSGQAAKTVTDQKNIMHKHIEDQTETSLASSTQQQLPSQKGTNVEKATSGDCSSENRIDKVSPDNSSSDGVGVLKGRPMSPGTLALMCDEHDTMFMTAVSPSEPISHTCNISSQLPCGQKMTELYAEQEKIVLTKFRDFLNRVITMGEINETKYSSLARSELESHRDPVVNGTENARTETVDEGATKIGVAKAVVHPLATKNTIRSILRAFLGFVHFSTVAGVARCRRRLISARGRRPALDSFAARLSGLQLHSLSFSGPLPKNQIHLSPFFSFPRLHLCIAGSSSFADGHWVYSVKWRRWLPGSMELKKIVHLGLQGVALALEYLEFRLNLRKMMELWLISTAFIHELGLICISLFGTQSLDRSLTGSILPIFVITFKARRARVSSHHQTGPGYSSVKSLVETPTRNSVKADTDTRFNRRTRGYRDRTASSSSTLSDSSSGRQAVTERWQKKEKEKENLVNMTEEEKDKKNKKKRKKKDEDSAELKLRVALDMCSKRGDVMGALSLYDSALAKGVKLGQHHYTVLLYLCSSAAVGVVRPAKSGTGSRTLNALLSSATEAANVSADLNYASDSEVLVSALNSAEKSANPFAKDGSSSSRQEDHGIMVSEDVKKYALQRGFEIYDSMCLDKVQVNEAALTSVARMAMSMGDGDRAFEMVKQMKIMGINPRLRSYGPALSTYCSNGEIDKAFDVEKHMLDHGVYPEEPELEALLRVSVQAGKGDKVYYVLHKLRSSVRKVSPSTASLIVDWFKGRQASRLGKRRWDIGSIKEAMENSGGGWHGQGWLGKGKWEVSHTTIGDDGMCKCCGVHLATIDLDPIETENFAKSVASIAVMREKKLNFQKFQAWLDYHGPFEAVVDAANVGLFRQRKFKPSMVNAVVNGIRQKLPSRKFPLIILHHRRIKGEKMGEPINRALIDRWNNADALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDHLFQLLGNDFFPKWKERHQVRFSFTDSGPQFHMPPPCSVVIQESEQGHWHVPIETEINYESERRWLCITRSTSGMVCEDSSTATGNN 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02286 1464 MobiDBLite consensus disorder prediction 91 173 - -
Aip03g02286 1464 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 176 211 IPR005172 -
Aip03g02286 1464 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 262 296 IPR005172 -
Aip03g02286 1464 Gene3D Tetratricopeptide repeat domain 1029 1447 IPR011990 GO:0005515
Aip03g02286 1464 Gene3D - 1236 1410 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 1 38 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 868 904 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 810 833 - -
Aip03g02286 1464 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1090 1124 IPR002885 -
Aip03g02286 1464 PANTHER OS02G0273800 PROTEIN 849 1458 - -
Aip03g02286 1464 PANTHER UNCHARACTERIZED 849 1458 - -
Aip03g02286 1464 SMART CXC_2 174 214 IPR033467 -
Aip03g02286 1464 SMART CXC_2 259 300 IPR033467 -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 443 498 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 446 490 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 849 867 - -
Aip03g02286 1464 Pfam Pentacotripeptide-repeat region of PRORP 896 959 IPR033443 -
Aip03g02286 1464 Pfam Pentacotripeptide-repeat region of PRORP 1031 1177 IPR033443 -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 20 38 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 834 848 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 154 173 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 1 17 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 809 904 - -
Aip03g02286 1464 MobiDBLite consensus disorder prediction 101 132 - -
Aip03g02286 1464 ProSiteProfiles CRC domain profile. 175 299 IPR005172 -
Aip03g02286 1464 Coils Coil 874 902 - -
Aip03g02286 1464 Pfam Protein-only RNase P 1218 1444 IPR031595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02286 Aip-Chr3 35419322 35432110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02286 76 584 CPP Transcription Factor Family AT4G29000 55.224 2.95e-175 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aip03g02286 PRORP 1.1e-73 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02286 K18213 - gmx:100809412 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02286 03 35419322 35432110 Aip03g02286 03 35419322 35432110 ECH