Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02285 ATGGGGAGCGTTCACAAAAATTCAACAAAGAGTTCTGTTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCTAGTGAAGAAAATGATATAAATATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTTGATCATGGAGATGGATTTGGTGAAGTTGAGAAAAAGTTAACTGAGTTGACCAAGGATGACATTTGGGGTATTGAGCAAGATAGTGTAGAGTACAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAGGAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCCAGAATTAAATTTCACTATAATATGAAATTGAGGAAGTGGAAAGTCACTGCATTTGAAGAGACTCACAATCATGACCTTATCCCACCTAAATATATACAATTTGTCTCCGCATATCGCGTAATGACCGAGGCCGACAAAGCACAAGCCAACAGTCTGCATGATTATGGTGTGAGAACTTGCCATATAATGGGGTTCATGTTAAAGCAAAAAGGAGGACCTGAAAAAATTGGTTTTACAAAGAAGGATTTGTATAATCATTTCGACAAACCAAAGCGTGCTAAAGTTAAAGATGGTGATGCATATGCAGCATTGAGTTACTTGATTTCTAAGGCCGATGAGGATCTATTGTTGCAAGGAAAATTTACTCTGAAAGATAATAAACTTGAAAATTTAGCATGGGCTGACGGAGCTAGCATAACCGATTATCAATGTTTTAGTGATGTACTAGCATTTGACACAACATACCAGAAGAATAAATATAACAAGCCATTAGTTGTCTTCTCAGGAACTAACCATCACGGTCAGACATGCATATTTGGTTGTGGCTTGCTAGCAGATGAGAAGCATGAGACATATGTATTAGTTTTGAAGATTTTTCTTGAAATAATGGGTAATAAACATCCAACAACAGTGGTGACAGATGGTGATCTTGCAATGAGAGGAGCAATTAGAGAGGTGATGCCAAATGCAACGCACAGACTTTGTGCGTGGCATTTACATCGCAATGCGTGTGAAGCTATCAAAAATTCTGAGTTTCTTCATGGATTGAAGCACCTTATGTACGGGATTTTTTTTCTGGATGAGTTTGAAGATAAATGGCATCGCTTAGTATCAAAATTCAAGCTTTCTGAAAACGAATGGGTGAAAAAAACATACGAGATCAAAAGGATTTGGGCTTCTACATATTTGAACGACACGTTTTTTGGTCAAATTAGAACTACGTCACAATGTGAAGGAATTCATTCGTTGATAAAGCACTATATTGGTAAAAAATGTTATCTTTTGTATTTGATGCATAATCTTAACGAGTCAGTGAGGCAATATCGGACAAATGAGCTATTATCTGATTTTAAGTCATTGTTCTCAAGTCCAGTTTTAACTACATGTTTCGAAGACATCGAAAAGGAAGCAGCCAAAATTTTTACCCATAATATGTTTAAAGAGGTAAGGAATGAGATACTAGAAGCGAGTAAACTAAACGTTGTCGGCCATTCAAAGAATGGTAACAAAATTGAGGTGAGAATGAACAAATATCAAGAGCCGGCTATTGAATATAAGGTTCGGTATGATAGAAGCACTAACAACTTTGCTTGTGATTGTCGATTATTTGAGAGTCGTGGTATCCCTTGTTCCCATATTTTTTGTACTATGAGACATGACCATATTAGCACTATTCCTAATACTCTTATTCACAAGAGGTGGACGAAAGATGCTAAAAAAGAATACATTAGTTCACTTACCGCTGAGGATATTGAATCTGAAAAGATTGCTGGTGTTAGGTACGGTGCTCTAGCGACGCTTTGTTTTACACTATGTGATAAAGCATCAAAACATCGAGATGACTTCATGGAGATCAGAGAAGACATTTTTGGATTGATTATGAAACTCCATAAAAGACACAATCCAAATGAGAAGCTTCCTTCTACCGCCAACTTGGTAGGTGACCCAAGTGTTGTGAAGACAAAAGGAGTCCCACGACAAACAACCAAGACTGCTAAGGCCCGTAAGTATTCGCATTGTAAACGGATTGGTCATACGGTTTGTAGGTGTCCAAAACTATATGGTGGAGAATGCTCACTAAGTTTGAACGAAGAAAAATTGAATACTTACAATGACCAATCAAGTACAGAATCAAATGGTGTTACGGATATGTCTGATGAGGAAACAATACACCAATGTAATGAAAAACGTAGTGATTTATTTGAAAATATCCAGAAAAAAGTGAATAAGCCTCATGTCCAATCTACAGAAGTTCAAAGCAACCACTACAACGAAAACAGAACAGAAAAGCCTAGTGCACAAACAAAAATAAATGCACCTGAAGCTGCTTCTGAGGACACAAAGAAGGATAGAATTTCAAGTGTCCAAAAGAGTAATAAAAGAAAGCGAGTAGAAAACCAAATAAAGAAGATCATCAAGTCCACCGAAATTGGAACTTATGGTGCTATATCCTCTACAAAGGGTATTGAGAATTTTCAATACATGAATGGATTACCTATGTACCCCAGTTTTAATGGATATTCCATGCCACCTTGTTATTCATACAGTGGAGGTGGAACACCCATGTTCCAGATAAATCCATCACATGCTAATGTACCAAATTACTACTATTATTGGAATGCAAGAGTTCAAGATTTTAACAAGAAGAAGAATTAA 2727 0.3674 MGSVHKNSTKSSVEFDDLSFEYSGSSEENDINISQKKGTIDEAMKMVDHGDGFGEVEKKLTELTKDDIWGIEQDSVEYNLNMRQMVCNREGTRRKKYLEMENRKRDHRPITRVMCQARIKFHYNMKLRKWKVTAFEETHNHDLIPPKYIQFVSAYRVMTEADKAQANSLHDYGVRTCHIMGFMLKQKGGPEKIGFTKKDLYNHFDKPKRAKVKDGDAYAALSYLISKADEDLLLQGKFTLKDNKLENLAWADGASITDYQCFSDVLAFDTTYQKNKYNKPLVVFSGTNHHGQTCIFGCGLLADEKHETYVLVLKIFLEIMGNKHPTTVVTDGDLAMRGAIREVMPNATHRLCAWHLHRNACEAIKNSEFLHGLKHLMYGIFFLDEFEDKWHRLVSKFKLSENEWVKKTYEIKRIWASTYLNDTFFGQIRTTSQCEGIHSLIKHYIGKKCYLLYLMHNLNESVRQYRTNELLSDFKSLFSSPVLTTCFEDIEKEAAKIFTHNMFKEVRNEILEASKLNVVGHSKNGNKIEVRMNKYQEPAIEYKVRYDRSTNNFACDCRLFESRGIPCSHIFCTMRHDHISTIPNTLIHKRWTKDAKKEYISSLTAEDIESEKIAGVRYGALATLCFTLCDKASKHRDDFMEIREDIFGLIMKLHKRHNPNEKLPSTANLVGDPSVVKTKGVPRQTTKTAKARKYSHCKRIGHTVCRCPKLYGGECSLSLNEEKLNTYNDQSSTESNGVTDMSDEETIHQCNEKRSDLFENIQKKVNKPHVQSTEVQSNHYNENRTEKPSAQTKINAPEAASEDTKKDRISSVQKSNKRKRVENQIKKIIKSTEIGTYGAISSTKGIENFQYMNGLPMYPSFNGYSMPPCYSYSGGGTPMFQINPSHANVPNYYYYWNARVQDFNKKKN 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02285 908 SMART 26again6 553 580 IPR006564 GO:0008270
Aip03g02285 908 MobiDBLite consensus disorder prediction 799 819 - -
Aip03g02285 908 Pfam MULE transposase domain 265 359 IPR018289 -
Aip03g02285 908 MobiDBLite consensus disorder prediction 660 687 - -
Aip03g02285 908 PANTHER OS02G0262500 PROTEIN 72 644 - -
Aip03g02285 908 MobiDBLite consensus disorder prediction 764 819 - -
Aip03g02285 908 Pfam FAR1 DNA-binding domain 80 144 IPR004330 -
Aip03g02285 908 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 644 IPR031052 GO:0006355
Aip03g02285 908 MobiDBLite consensus disorder prediction 765 798 - -
Aip03g02285 908 ProSiteProfiles Zinc finger SWIM-type profile. 542 578 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02285 Aip-Chr3 35401827 35404924 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02285 MULE 3.8e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02285 - - adu:107487303 1704.49