Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02283 ATGGCAAGCATGCACTTGGGTCTTCGCTTTGACAATGTCATAACATTGAAGGAATCCTTAGGTGCAGTGAGGAGGACCGCCATTGCTAGTGTTATTGCTGCTGCTCTTATCGGTGGCGCGCGGGATCAGCCAGTGGTCGAAGTGGTCCGAGGCGGTGAAGGTGCTGGCCCACTGCGCCAAGCCCTAGTTTCGTCGTGGGCAGAACGTTGCACATCGCTGGTCAAGACTCCGATGGGGGCAGTTCGGATGATTATTCCGGACATTATCGTGGTACTGACGACGAATACGATGATGAGGAGGACTTTGAGCCCTGAGGTGGTCCCGAAGCAAGGGAAAAAGGTGTTGGTGATGGTGTTAATTATGTCTAGTGGTGCGAATGACGAGGTAGGTGGTGCGCCAAGCCGACAAGTCTTTGCGGATGACTTCCTGGGTAGAGAGTTTGCAACGGAGGAGGATGCTTATGCTGCATACAAGGAGTTTGCCAGATTCAGGGGTTTTGGAGTTCGGAAGGGAGATGTAGCTCGGGTTAATGGGGTTTTGGTCAGAAGAGACTTTTTTCGCCATCGACAAGGGACAAGACATCCTAAGCACTATGACCGTCCTGAGCGAGTAAGGGAGGAGAGGCTCGAGAGCCAGACGAATTGTAAGGCAAAGCTGAAGATTTACTACGATGTGCAACATAGCGTTTGGAAGGTTAGAACCATCATGGACGAACACAACCACGAGCTTGCTCCGGTGATGTTCACGCATCTCCTTCCCAGTCACTGGAAGATGAGTGACGGGGACAAGGCACATGTGGATAGTTTCAAGCAGTTTGGGATCGCAACAGCTAAAAATAATGGCTTAGATGGCTGGGCAGTCTGTTACTTTGAGGGCAAGGTGAATGCGGATATGATGACGGTTGCACGCTACACATGGACCAAAGATAATCGTTTGGGAATCCTATTTTGGGTGGATGATGAGATGATGTCGGATTATCAGGTCTTTGGTGATGTCTTGGCATTCGATTCCACGTATCATGCTAACAAGTACAGGAAGCTGCTGGTGGTTTTCTCTGGTTCAAATCACCACAAACAGACATGCATATTCGGGTTCGCGCTACTGGAGGATGAAGAGGCGATGTGTGCTGCAATTGCAGAGGTGATGCCGACCGTGACACATAGACTGTGTGGGTGGCACCTGGAGAAGAAATACGTCCAAAGGGTTAAGGACACAGAATTTTGCAAGGTTTTTAAGAAAGCTCTGTATGAAAATTTTGAAATCGACGACTTTGAAGAGTATTAG 1284 0.493 MASMHLGLRFDNVITLKESLGAVRRTAIASVIAAALIGGARDQPVVEVVRGGEGAGPLRQALVSSWAERCTSLVKTPMGAVRMIIPDIIVVLTTNTMMRRTLSPEVVPKQGKKVLVMVLIMSSGANDEVGGAPSRQVFADDFLGREFATEEDAYAAYKEFARFRGFGVRKGDVARVNGVLVRRDFFRHRQGTRHPKHYDRPERVREERLESQTNCKAKLKIYYDVQHSVWKVRTIMDEHNHELAPVMFTHLLPSHWKMSDGDKAHVDSFKQFGIATAKNNGLDGWAVCYFEGKVNADMMTVARYTWTKDNRLGILFWVDDEMMSDYQVFGDVLAFDSTYHANKYRKLLVVFSGSNHHKQTCIFGFALLEDEEAMCAAIAEVMPTVTHRLCGWHLEKKYVQRVKDTEFCKVFKKALYENFEIDDFEEY 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02283 427 PANTHER OS02G0262500 PROTEIN 372 426 - -
Aip03g02283 427 PANTHER OS02G0262500 PROTEIN 141 273 - -
Aip03g02283 427 PANTHER OS02G0262500 PROTEIN 286 372 - -
Aip03g02283 427 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 141 273 IPR031052 GO:0006355
Aip03g02283 427 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 372 426 IPR031052 GO:0006355
Aip03g02283 427 Pfam FAR1 DNA-binding domain 157 244 IPR004330 -
Aip03g02283 427 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 286 372 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02283 Aip-Chr3 35365161 35367704 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02283 FAR1 4.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02283 - - aip:107607194 446.432