Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02267 ATGATTGTCGACGGAATTGGATCATTTAATAGAATAGATTTTTCTTCTTTAACATATGAGGAGATGCGGAGGTTTGAGTTTGTGGACTTGCAGACAGCTTATGACTTCTACAATGAGTATGGGCGGATTCAAGGGTTTTCTATTCGGAGGTCAAAGGTTGGAAGAAGCACAAAGATTGGATCGGAGGGAGAAATTTTATGGCAAATTTTTGTTTGCTCGAGACAAGGTGAGAGAGACACCAAACATATTCATCGGGTAGAAAGGAAAATGGATCCTCGACCAATTACACAATGTGGGTGTGGTGCACAAATAAAGGTTCACGTTGATCATAGCACTGGCCGTTGGTTCGTAGATAAGTTTTGTGACGAACACAACCATGAGATGCTAGATGCAAGGTTCCGGGGGTTGTTACGTTCTCATAGAGTAATCAAGGAAGGGGACATGCATCAAATTAACTCGATGAAAAAAGCTGGGATGCGTGTGTCAATCTTATTTCGTGCATTTGCCACCCAATGCGGGGATTTGAGACAGTTGGATTTGAAATTAAAGACATCTACAATGCAATAG 567 0.4145 MIVDGIGSFNRIDFSSLTYEEMRRFEFVDLQTAYDFYNEYGRIQGFSIRRSKVGRSTKIGSEGEILWQIFVCSRQGERDTKHIHRVERKMDPRPITQCGCGAQIKVHVDHSTGRWFVDKFCDEHNHEMLDARFRGLLRSHRVIKEGDMHQINSMKKAGMRVSILFRAFATQCGDLRQLDLKLKTSTMQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02267 188 Pfam FAR1 DNA-binding domain 35 129 IPR004330 -
Aip03g02267 188 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02267 Aip-Chr3 34985959 34986525 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02267 FAR1 8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02267 - - ahf:112803492 266.544