Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g02263 | ATGTCTGCAGAAAAGGGGTATGTAGGGTTGGGAGAGGTTGGTGAAATGGAAGAAAGCATTGGGTTGAACCTGAAAGCAACTGAGTTGAGGCTTGGGTTGCCAGGGTCAGAGTCACCGGTGAAGAGTACTAGTTTGGGGGCAAAGAGGGGTTTCTCGGACGCCATTGATGGCAAGTGGGTTCTTTCTGGGAATGGAAACGCTGGATCTGACTTGGCTTTGGGTAAAGATGCTTCCTTGTTCTCTCCTCCCTCTGACAATACCAACAATGACCCTCTTCCACTTCCACAACCTTCAAAGCCTATTCCTGCTCCTGCTGCAAAGGCACAAGTTGTTGGATGGCCACCAATCCGTTCATTCAGGAAGAACTCAATGGCAACTCAGCCTCCTCAAAAGAATGAAGCTGATGCAGAACCCAAGCCTGGTTGCCTTTATGTCAAAGTCAGCATGGATGGCGCCCCATACTTGAGGAAAATGGATCTCAACAATTATGCTTCCTATAGGGACCTCTCTTCAGCACTCGAAAAGATGTTTAGTTGTTTTACTCTCGGTCAATGCGGCTCTCATGGGGTTTCTAGCCGAGATAATTCAAGCGAAAGCAAATTGAGGGATCTCCTCCACGGCTCGGAATACGTGCTCACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGACTCTTGCAAGAGGTTGAGGATAATGAAGAGTTCCGAAGCAATTGGGTTAGCACCTAGAGCCATGGAAAAGTGCAGAAGTCGCAATTAG | 789 | 0.4791 | MSAEKGYVGLGEVGEMEESIGLNLKATELRLGLPGSESPVKSTSLGAKRGFSDAIDGKWVLSGNGNAGSDLALGKDASLFSPPSDNTNNDPLPLPQPSKPIPAPAAKAQVVGWPPIRSFRKNSMATQPPQKNEADAEPKPGCLYVKVSMDGAPYLRKMDLNNYASYRDLSSALEKMFSCFTLGQCGSHGVSSRDNSSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAPRAMEKCRSRN | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g02263 | 262 | Pfam | AUX/IAA family | 42 | 253 | IPR033389 | - | |
Aip03g02263 | 262 | SUPERFAMILY | CAD & PB1 domains | 138 | 243 | - | - | |
Aip03g02263 | 262 | PANTHER | AUXIN-INDUCED PROTEIN | 12 | 87 | - | - | |
Aip03g02263 | 262 | PANTHER | AUXIN-INDUCED PROTEIN | 100 | 255 | - | - | |
Aip03g02263 | 262 | MobiDBLite | consensus disorder prediction | 74 | 107 | - | - | |
Aip03g02263 | 262 | ProSiteProfiles | PB1 domain profile. | 142 | 244 | IPR000270 | GO:0005515 | |
Aip03g02263 | 262 | Gene3D | - | 137 | 255 | - | - | |
Aip03g02263 | 262 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 100 | 255 | IPR003311 | GO:0005634|GO:0006355 | |
Aip03g02263 | 262 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 12 | 87 | IPR003311 | GO:0005634|GO:0006355 | |
Aip03g02263 | 262 | MobiDBLite | consensus disorder prediction | 88 | 102 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g02263 | Aip-Chr3 | 34840108 | 34842358 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g02263 | 85 | 247 | B3 DNA Binding Superfamily | AT3G61830 | 29.878 | 2.29e-09 | 55.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Aip03g02263 | AUX_IAA | 2.5e-85 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g02263 | K14484 | - | gmx:100803754 | 346.665 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g02263 | 03 | 34840108 | 34842358 | Aip03g02263 | 03 | 34840108 | 34842358 | ECH | |
Aip03g02263 | 03 | 34840108 | 34842358 | Aip05g03252 | 05 | 137820670 | 137823882 | PCT |