Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02229 ATGGCAACTCATGAATTACACATAATTCAATACTCATCTTTGAGTGCACTTTTGCTGCAACTTCTTCAACTGTCATCATTTCTTTTCCTCTCATCACTTGGGTGCACTCCACCAGACAAGTACTGTATCAATTGTGGGTCGCACAGCAATGTTGTTGAAAGCGGAAAGATTTACACTGGTGACTCAAACTCTTTAGTCAATTTTAGCAGCACAAGCAAGATAGAAACCAGCCAATCCTCAGTGTCTTCACCTCTCTACCAAACAGCAAGAATCTTCCCAAATCAATCTTGGTATGACTTCCCAGTTAAGATCAGTGGCATTTACTTACTACGCCTTCACTTCCTTGCTTTCAAATCCCCAAGTAATCTCCCTTCTGCCACATTCAGTGTCTCAGTACATAGATTTGGGCTTTTGCAAAACTTTGAGGCCCAGAACCATACCAATTCTGCTTCGGTCAAAGAGTTCTTCATGAACATAACTGCAGGAAGCTTCAGACTTATTTTTACTCCTCAGACAGACTCGTTTGCATTCGTGAATGCCATTGAACTCTTCTTACTCCCCCGCTTCTTAATTGCCAATCAAGTCTCGCGTTTCAATCCGCAACCTTCCATTGGACAAGATTCCTTGTCCACCTACAGCGGCGTGCTTTCCCGAGTGTTGGAGACCAAATACAGGCTTAACATCGGCGGTCGTGTCATCCCAAGAGGGGAAGACCCATTATTGAGGCTCTGGAGCTCGGATGAAACTTACCTTGTTAATCAGGTGAGGAATTTTGAATTCCCTGGTAACATAACATTCCTGGTTGGTAAAGACTCTGATGGTCCAAATGCTAATTATTATACAGCGCCCCGTGTTATCTACCAAACAGCTAGAGAAACTAATGATACCTCTCAAAACATAACTTGGGTTCTTCCAGTTGACATGAATGTAGACCACCTTGTTCGAGTTCACTTTTGTGACATTTGGAATATCCAGGATGGTCTTACAATCTTTGGTCTATACATTTATGACCAGTTTACTTTGTTTGTAAATAATGACACGTTAGTGTCTCAACTATTGCCTGCTCCTTATTATTATGATTTTTTGGTACACTCTGATGATTCAGGCTTCATGAGGATTAGTGTAGAGCCACAACAATCTTCCCTTATTGTCAGAGCCTTTTTAAGCGGACTAGAAATAATGGTAATGGGTAACGATTCAACAGATTTTCGTCCCCTAACGGACCAATCCAATGGCAACCACCATAGTCTTCTTCTGGTGTTAGGTTCAGTTATTGGATGCTTGGTGCTAATTTTTTTGGTGGTAGTCTTGGGGTTAGTTTGGCATCTTAAGATCCGTAAACAGAGGCCTTCTGATGTGTTGTCAATTCCTACCATTGTAGGAGAGGGTTCTCCAAACAGAACGAGTGAGAGAAACGTTAATCTTGGACTAAAGATCTCTTTGCATGATATTCAATTGGCAACCGAGAATTTCGACGAGAAACAAATAATTGGAACTGGTGGTTTCGGCAATGTATACTTGGGAGTCCTCAGGAATGGTACAAGAGTAGCTGTGAAGCGCAGTAAATCAGGGTCAAGTCAAGGCCTTCTGCAGTTTGAAACAGAGATCATGGTTTTGTCTAAGATTCGTCACAGGAACCTTGTTTCTTTGATAGGGTATTGTGAGGAGAATTCTGAAATGATATTGGTTTATGAATATATGGAGAATGGGGCACTCAGAGATCATTTATACGATACCAAATTGCCAAGCCTGTGTTGGAAGCAGAGACTTGAGATTTGCATTGGAGCTGCCAAAGGCCTTCATTATCTTCACGAAGGAGCACCCGGGGGAATCATCCACCGCGATGTGAAGTCTACTAACATATTGCTTGATGAGAACCTCGTGGCTAAGGTTTCAGACTTCGGCATTTCGAAAACAGCTCCACTTGACCATCAAACACATGTTAGTACTAATGTCAAAGGCACTTTTGGGTATCTTGATCCTGAATATTTTAAGACGGAAAAATTGACAGAAAAATGTGATGTCTATTCATTTGGGGTAGTTCTTCTCGAAGTGTTGTGTGCAAGGCCAACCATTGACCAATCTCTTCCAAGAGAGCAAATGAACTTAGCAGATTGGGGAATCCTTTGCAAAAGAAAAGGGATGTTGCAAGCCATAATTGATCCTTCCATAAAGGACCAAATAGATCAAAACTCGCTCGAAAAATTTAGTGACATAGTGGGAAAATGCCTACAAGAATATGGTTCTAACAGGCCAACCATGGGTGAAGTGTTGCGGAGCTTGAAGTATGCTCTACATTTACATGAAGCTTCAATCCACGAAGATGGTTCCAGTATTGAGAGCGTTAATAATAATGCAGCAAAAGCTTTTTAA 2373 0.4151 MATHELHIIQYSSLSALLLQLLQLSSFLFLSSLGCTPPDKYCINCGSHSNVVESGKIYTGDSNSLVNFSSTSKIETSQSSVSSPLYQTARIFPNQSWYDFPVKISGIYLLRLHFLAFKSPSNLPSATFSVSVHRFGLLQNFEAQNHTNSASVKEFFMNITAGSFRLIFTPQTDSFAFVNAIELFLLPRFLIANQVSRFNPQPSIGQDSLSTYSGVLSRVLETKYRLNIGGRVIPRGEDPLLRLWSSDETYLVNQVRNFEFPGNITFLVGKDSDGPNANYYTAPRVIYQTARETNDTSQNITWVLPVDMNVDHLVRVHFCDIWNIQDGLTIFGLYIYDQFTLFVNNDTLVSQLLPAPYYYDFLVHSDDSGFMRISVEPQQSSLIVRAFLSGLEIMVMGNDSTDFRPLTDQSNGNHHSLLLVLGSVIGCLVLIFLVVVLGLVWHLKIRKQRPSDVLSIPTIVGEGSPNRTSERNVNLGLKISLHDIQLATENFDEKQIIGTGGFGNVYLGVLRNGTRVAVKRSKSGSSQGLLQFETEIMVLSKIRHRNLVSLIGYCEENSEMILVYEYMENGALRDHLYDTKLPSLCWKQRLEICIGAAKGLHYLHEGAPGGIIHRDVKSTNILLDENLVAKVSDFGISKTAPLDHQTHVSTNVKGTFGYLDPEYFKTEKLTEKCDVYSFGVVLLEVLCARPTIDQSLPREQMNLADWGILCKRKGMLQAIIDPSIKDQIDQNSLEKFSDIVGKCLQEYGSNRPTMGEVLRSLKYALHLHEASIHEDGSSIESVNNNAAKAF 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02229 790 Pfam Malectin-like domain 43 394 IPR024788 -
Aip03g02229 790 CDD STKc_IRAK 497 762 - -
Aip03g02229 790 Gene3D Transferase(Phosphotransferase) domain 1 567 788 - -
Aip03g02229 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Aip03g02229 790 Gene3D - 40 185 - -
Aip03g02229 790 Gene3D - 219 396 - -
Aip03g02229 790 Pfam Protein tyrosine and serine/threonine kinase 494 761 IPR001245 GO:0004672|GO:0006468
Aip03g02229 790 Gene3D Phosphorylase Kinase; domain 1 462 566 - -
Aip03g02229 790 SUPERFAMILY Protein kinase-like (PK-like) 473 761 IPR011009 -
Aip03g02229 790 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Aip03g02229 790 PANTHER OS07G0166700 PROTEIN 33 777 IPR045272 GO:0004714|GO:0006468
Aip03g02229 790 PANTHER BNAC03G27170D PROTEIN 33 777 - -
Aip03g02229 790 ProSiteProfiles Protein kinase domain profile. 491 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02229 790 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02229 Aip-Chr3 34263521 34265916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02229 34 770 Receptor kinase-like Gene Family AT4G39110 41.878 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip03g02229 Malectin_like 8.5e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02229 - - adu:107480521 949.118