Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02215 ATGGCACACTGGCTCAAAGCCGCTGAAGATTTATTTGAAGTTGTGGATCGAAGAGCGAAATCTGTTGTCACTGATTTATCAGATGAACAATCTAATTTTAATTCTCCAGCTTCTACTGGGCAAGGATCACATGGCAAGAGAAGGAAATCAAAATCCAAGGCTCAAAAGGGAAAATCTAAAAACTCATCTCCTACAAATACTGATACTACCAAAGAGAAAGGTAACACACCAGAAGCACCGGCTGATCATGCAGTAGAAAACGATGGGAGTGCTTTCACTCCTACAAATCAACCAATCAAAGACAATGTAGAGGCATTTGATACTGCTCCTGAAGCTACCACCACTGTTATCGCTAATGGGGAGCCCGGCAAAGAGAATGCTCTAGACATGCCTAAGGAGTATCCTTCTCCGGATACCAAAGGAATTGAAGGCTCCACTGAAGACAAACCCACTAATGCTGAACAAGTTATCAAGAATGAGAATTTGGATTCCGATGTGAATATGGATCAAGAGAGAACTAAATCTGTGGCCAATGACAAAAGTTCCAATCGTGGTGGTGACACTATAATTCAAGATGCTGATATCAAAGCTGAATCTTTTGTCAATAGAAGCACTCAAGAAAATCATAAAACTGACATTTCTCCGAAGAAACTACAGGATCAACTTGATCAGGCTCAAGGACTACTCAAAGCAGCAAAATCTACTGGTCAGTCCAATGAGGCAAGGTTAGCTAGGGTTTGTGCTGGACTATCATCTAGTCTTCAGGAATACAAATCTGGAAATGTAGAGTTAGAAAAACTGCTTAGTGCAGAGAGAGAACTGAATAAATCATTTGAAGTTCACATAGAACAGCTACAGAAGGATTTGTCTCAAAATAAAAGGGAAGTAGCAAAAGTTGAATCAAACATGGCTGAAGCCTTGGCTGCAAAAAATTCTGAAATTGAGGCACTTCTTAGTTCGATTGATGCAGTAAAGAAGCAGGCTGCATTATCAGAAGAAAATATAGCTTCCCTTCAGGCAAACATGGAGTCTATGATGAAAAACCGAGATCAAATAGAGACAAGAATGATGCAGGCATGTAGAGAGGAACTAGCATTTGCTGAGCGAAGAGCAGAAGAAGAGCATGCAGCACATAATGCTACCAAAATGGCTTTTATGGAAAAAGAAGTGAAATTGGAGCAGAGAGCTATTGAGGCAGCTACAGCTCTTGCAAGGATACAGAGAATAGCAGATGAGAGGACCTTGAAGGCCACAGAATTGGAGCAGAAGGTGGTACTTCTTGAGGTTGAGTGTGCATTCCTAAATCAAGAATTGCAAGATATTGGAGATCGCGTGCGCCGTGAACAAAAGAAGTCACCAGAAGAGGCAAATCAAGTAATTCAGATGCAGGCATGGCAGGAAGAAACAGAGCGAGCATATAGGAGTCAGAGAGAAGCTGAAAACAAGATTTCTTCAATAGAGGCAAGTCTGCAAAAGATGAGAGTGGAAATGGCAGCCATGAAGAGGGATGCTGAGCATTACTCCCGTCAGCAGGAGCATGTGGAATTGGAGAAACGCTATCGCGAACTTACGGACCTTTTGTACTATAAACAGACACAATTAGAAGCCATGAGCAGCGAAAAAGCTGCCGCTGAGTTTCAATTGCAGAAAGAATATAAGCGTCTACAAGAAGCACAGGCTGAGACTGAAAAAAATAGAATTTCTCGTCGACCATCTTCATCTTGGGAAGAAGATACTGAAATGAAAACCCTCGAGCCACTTCCTTTGCATAATCGCCATTTGGTTGGGGCAAGCATTCAGTTGCAGAAAGCGGTGAAACTATTAGATTCAGGAGCCGTAAGGGCCACAAGATTTCTCTGGCGTTATCCAACGGCTCGAGTTGGTCTATTTTTCTATCTGGTGTTTGTACATCTCTTCTTGATGTATCTCTTGCATTGCCTTCAGGAGCAAGCTCACAATTTGGATGCTAGAGAGGTTGCAAAATCTTTGGGACTCTCTGACCCGAATTACCCTACGGCTGCAGCACTAGGATATCGCGCGCCTGAGCTCTCGAAACTCAAGAAGGCTAACACAAAATCTGATATATACAGCTATGGTGTGATCTTGCTGGAAATCTTGACAGGAAAGTCACCTGGTGAAACTAGGAATGGCTTGGATTTGCCTCAGTGGGTTGCTTCTATTGTCAAAGAAGAGTGGACAAATGAGGTTTTCGATTCGGATTTGATGAGGGACAAGGCATCATCCTCAACAGTTAATGATGAGTTGCTTAACACCTTGAAGCTTGCTTTGCACTGCGTTGATCCTACACCGTCACCACGGCCGGAAGCTCACCAAATTCTCCAGCAGCTAGAAGAGATTAGACCAGAGTTACCACCAGTTAGCCCTGGAGAAGAGTCTTGGCATCATGTTTAG 2412 0.4291 MAHWLKAAEDLFEVVDRRAKSVVTDLSDEQSNFNSPASTGQGSHGKRRKSKSKAQKGKSKNSSPTNTDTTKEKGNTPEAPADHAVENDGSAFTPTNQPIKDNVEAFDTAPEATTTVIANGEPGKENALDMPKEYPSPDTKGIEGSTEDKPTNAEQVIKNENLDSDVNMDQERTKSVANDKSSNRGGDTIIQDADIKAESFVNRSTQENHKTDISPKKLQDQLDQAQGLLKAAKSTGQSNEARLARVCAGLSSSLQEYKSGNVELEKLLSAERELNKSFEVHIEQLQKDLSQNKREVAKVESNMAEALAAKNSEIEALLSSIDAVKKQAALSEENIASLQANMESMMKNRDQIETRMMQACREELAFAERRAEEEHAAHNATKMAFMEKEVKLEQRAIEAATALARIQRIADERTLKATELEQKVVLLEVECAFLNQELQDIGDRVRREQKKSPEEANQVIQMQAWQEETERAYRSQREAENKISSIEASLQKMRVEMAAMKRDAEHYSRQQEHVELEKRYRELTDLLYYKQTQLEAMSSEKAAAEFQLQKEYKRLQEAQAETEKNRISRRPSSSWEEDTEMKTLEPLPLHNRHLVGASIQLQKAVKLLDSGAVRATRFLWRYPTARVGLFFYLVFVHLFLMYLLHCLQEQAHNLDAREVAKSLGLSDPNYPTAAALGYRAPELSKLKKANTKSDIYSYGVILLEILTGKSPGETRNGLDLPQWVASIVKEEWTNEVFDSDLMRDKASSSTVNDELLNTLKLALHCVDPTPSPRPEAHQILQQLEEIRPELPPVSPGEESWHHV 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02215 803 Pfam Golgin subfamily A member 5 428 645 IPR019177 GO:0007030
Aip03g02215 803 PANTHER GOLGIN-84 1 668 IPR019177 GO:0007030
Aip03g02215 803 Coils Coil 383 403 - -
Aip03g02215 803 MobiDBLite consensus disorder prediction 559 580 - -
Aip03g02215 803 Coils Coil 275 377 - -
Aip03g02215 803 Coils Coil 417 451 - -
Aip03g02215 803 MobiDBLite consensus disorder prediction 22 98 - -
Aip03g02215 803 MobiDBLite consensus disorder prediction 164 178 - -
Aip03g02215 803 MobiDBLite consensus disorder prediction 57 74 - -
Aip03g02215 803 PANTHER GOLGIN CANDIDATE 1 1 668 - -
Aip03g02215 803 SUPERFAMILY Protein kinase-like (PK-like) 663 792 IPR011009 -
Aip03g02215 803 MobiDBLite consensus disorder prediction 114 191 - -
Aip03g02215 803 MobiDBLite consensus disorder prediction 25 43 - -
Aip03g02215 803 Coils Coil 462 510 - -
Aip03g02215 803 Gene3D Transferase(Phosphotransferase) domain 1 655 791 - -
Aip03g02215 803 MobiDBLite consensus disorder prediction 148 163 - -
Aip03g02215 803 Pfam Protein kinase domain 674 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02215 803 Coils Coil 541 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02215 Aip-Chr3 33796198 33802507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02215 672 788 Receptor kinase-like Gene Family AT3G51740 72.650 3.76e-50 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip03g02215 Golgin_A5 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02215 - - gmx:100802162 815.453