Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02196 ATGGCAGTATATACTGGAGACGAGCGTTTTTCCACGAGAAGCAGAGGCTCTCAAAGAAATAAGGAATGCCACTGCAAACCACCCAATGGGGTTCATGAGAGCGGCACCAGAAGCCAGTCAGCTAATGGCGTTACTGTTGAAGGTGTTGAATTAATGCCAAAAAAGACAATTATAATTGGAGTGTTCATTGGATACTCTCTTCTCCACACGGCGCTTACGATTCCTCAAGATGGAAAAATTATAGCGCTGGATCCAGACAGAGAAGCTTATGATAAGGACTCCCATCCATAA 291 0.4433 MAVYTGDERFSTRSRGSQRNKECHCKPPNGVHESGTRSQSANGVTVEGVELMPKKTIIIGVFIGYSLLHTALTIPQDGKIIALDPDREAYDKDSHP 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02196 96 PANTHER O-METHYLTRANSFERASE-RELATED 52 91 - -
Aip03g02196 96 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 52 91 - -
Aip03g02196 96 MobiDBLite consensus disorder prediction 12 28 - -
Aip03g02196 96 Pfam O-methyltransferase 53 91 IPR002935 GO:0008171
Aip03g02196 96 MobiDBLite consensus disorder prediction 1 42 - -
Aip03g02196 96 Gene3D Vaccinia Virus protein VP39 48 93 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02196 Aip-Chr3 33426573 33426953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02196 54 91 Monolignol Biosynthesis Gene Families AT4G26220 63.158 1.14e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02196 K00588 K13272 gmx:100780516 66.6254