Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02183 ATGTCTTGGCAAACCTACGTGGACGAGCACTTGATGTGCGATATTGATGGCTCAGGCCAGCACCTCACCGCAGCCGCCATCATCGGCCATGACGGTTCTGTCTGGGCCCAGAGCGCAAACTTCCCTCAGGCAAAGAGTCAAGAGATAGCCGACATAATGAAGGATTTCGAAGAACCAGGGCATCTGGCGCCAACAGGGTTGCACATTGCTGGAACCAAATACATGGTGATCCAGGGTGAGCCAGGTGCTGTGATTCGCGGCAAGAAAGGATCTGGAGGGATCACCATTAAGAAAACCGGTCAAGCTCTTGTTTTTGGAATCTATGAGGAGCCTGTAACTCCTGGTCAGTGCAACATGGTCGTTGAGAGGTTGGGCGATTACCTCTCTGATCAGGACGCTGGCGTCAACCATGCCGCCGACGCCGAGGGCGACGAGGTCGTACCAGCGGAGAGTGCGACGCATGTGAAGGCCGAATTGGACACGGAGGCAGGTCATCTCGTCGTAGGAGGATATCTTCTCGGTCACTATGTCAAGTCTAACATGCCAATGTCGGCATACGAGAGGAGTTCTATAGCAAACACCCGGGTGAACTGGATGGAAACACCGGAGGCGTGGATCTTACGAGCTAAAGAAGGACGAAGTGAATGTGGAGATTGA 657 0.5358 MSWQTYVDEHLMCDIDGSGQHLTAAAIIGHDGSVWAQSANFPQAKSQEIADIMKDFEEPGHLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLSDQDAGVNHAADAEGDEVVPAESATHVKAELDTEAGHLVVGGYLLGHYVKSNMPMSAYERSSIANTRVNWMETPEAWILRAKEGRSECGD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02183 218 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
Aip03g02183 218 Pfam Profilin 1 131 IPR005455 GO:0003779
Aip03g02183 218 SUPERFAMILY Profilin (actin-binding protein) 2 131 IPR036140 -
Aip03g02183 218 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Aip03g02183 218 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Aip03g02183 218 Gene3D Dynein light chain 2a, cytoplasmic 1 132 - -
Aip03g02183 218 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Aip03g02183 218 CDD PROF 2 132 IPR005455 GO:0003779
Aip03g02183 218 SMART prof_2 1 133 IPR005455 GO:0003779
Aip03g02183 218 PANTHER PROFILIN 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02183 Aip-Chr3 33150474 33153738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02183 1 131 Cytoskeleton Gene Families AT4G29340 86.364 5.56e-83 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02183 K05759 - tcc:18588487 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02183 03 33150474 33153738 Aip03g02183 03 33150474 33153738 ECH