Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02179 ATGCCTAATAAGCGCTTTTCCCTCTCTTTTTTTTCGATCCAAATTAAAGCAAACTCACAACACTTAGTGAAATTTTCGTTCCCTCCGAAGCTCATTATCCCCTTTATCCCCTTTCTGGAACCACATGAATCACAGCGCCTTTGTTCCCTCCAAAGCTCATCACTCATCATCGCGAAGAACCCTCGCTCATTACCCAGTCACCATTCACCGCCAGTCACCACCCACCACTCACCACATCGCTACGCCGCTCACCAGCTCACCACTCACCAGCTCACACTCTCATCCTCACTCAACACACACAAAAGAGGAAAAAAAATCagaaaagtggagaacgggaagaagaagagaagaagagaggagagggaaaggaaggagaggacgacgccggctagggctccgccgcgcggaccatcgtcgttgcgtgcgctgaccgtcgcctcagcatcgccatctcgttcactcaccatcgccgctcagcatcatcatcgcgtgtgctcactgtcgctgctcagcatcgtcgtcgtcgctcagcatcgtcatcgccgctcACCTGAGAAGGCGCTGAATCTGTTCCAAGAACGCAAAGTCAGTGGAAAGGATACAAAGACTAATGAGACTAAGGCTGCTGTGCTGGCTATGGATGAATCAGTATTAGATGTAGATCAGGTGAAAAATCTCATTAAGTTTTGTCCTACTAAAGAAGAGATGGAACTTTTGAAGGGATACACTGGTGACAAAGAGAATTTGGAAAAATGCGAACAGGTTACAGAATTTAAGAAGAGTTTAAAAACTGTGAACTCTGCTTGTGAAGAGGTCCGAAAGTCTGTCAAGCTGAAGATCATGAAGAAAATTCTTTTTTTTGGGTAA 867 0.3149 MPNKRFSLSFFSIQIKANSQHLVKFSFPPKLIIPFIPFLEPHESQRLCSLQSSSLIIAKNPRSLPSHHSPPVTTHHSPHRYAAHQLTTHQLTLSSSLNTHKRGKKIRKVENGKKKRRREERERKERTTPARAPPRGPSSLRALTVASASPSRSLTIAAQHHHRVCSLSLLSIVVVAQHRHRRSPEKALNLFQERKVSGKDTKTNETKAAVLAMDESVLDVDQVKNLIKFCPTKEEMELLKGYTGDKENLEKCEQVTEFKKSLKTVNSACEEVRKSVKLKIMKKILFFG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02179 288 Gene3D - 188 265 - -
Aip03g02179 288 SUPERFAMILY Formin homology 2 domain (FH2 domain) 202 288 - -
Aip03g02179 288 PANTHER FORMIN-J 80 288 - -
Aip03g02179 288 Pfam Formin Homology 2 Domain 203 254 IPR015425 -
Aip03g02179 288 MobiDBLite consensus disorder prediction 91 140 - -
Aip03g02179 288 MobiDBLite consensus disorder prediction 113 130 - -
Aip03g02179 288 PANTHER FORMIN-LIKE PROTEIN 15A-RELATED 80 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02179 Aip-Chr3 33113532 33116274 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02179 205 288 FH2 protein (formin) Gene Family AT5G07740 60.714 7.73e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02179 - - ahf:112727809 143.665