Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02170 ATGGCCATGCCATGCAAATTGTTTTTCCGAAATCCCCCAGATGGTCTTCTTGAGATATCTGACAGAGTCTATGTTTTTAATTGTTGTTTCAACATTCGATGTGATTGGAGAGACGAATCTTATGAAGTCTACGTGAACGGGATTGTTGGTCAATTTCGAGAGAATGTGCCTAACGCTTCCATTATGGTATGCAATTTTCGCGAGGAAAACACTAAAAGCAAGTTGGATAACATATTCTCTAAGCATGAAATTAATCTCATGAACTATCCTTGCCACCACCATGGTTTCCCTATGCTCAAATTGGAGGCCATACATCATTTTCTAAATTCATGTGATAGTTGGCTCTCACATGGGCAAAATAAGGTGTTGTTAATGCATTGCGAGCATGGTGGCTTGCCAGTTTTGGCCTTCATGTTGGCTGCATTGTTGATTTTCTTGAAACAATATCAAGGGGAGCAGAGGACGTTAGATATGGTTTACAAGCAGGTACGTCGTGATTTTTTACAATCCTTAACAATGGTGAATCCAATCCCTTCCCAATTGCGGTATTTACGATATGTTTCCAAGACCAATATGGCCTTTGATTGGCCTTCATTGGATAGGACACTTAGGTTGGACTACATCGTTATGACATTTCTTCCAAACTTTAATGGGAATGGTGGATGTTTTCCAATATTTAGAATTTATGGCGAAGATCCCTTTCTTGTTGACAAGAATCCTAAGGTCCTATACTCAACACCAAAGAGTCCCAAAAACATTCAAGCTTATAAACAGGGAGAGTGTGATGATAAAATCAAAGTCAATATCAACTGTCGGATTCAAGGTGATGTGCTGATTGAAAGTGTTAATTTGGATAGTGACTTGGAAAATGAACAGATGATATTCCAAACGATGATTAACACAAATTTCATTAGATCTAATTTGTTGATGCTTAATCGGGAGAAAATTGATATTTTGTGGGATGCAAAAGACCGCTTCCCAAGGGATTTCAAACTAGAGATAACTTTCACAGAGAAAGATGTTGGTCCAAAGACTGATGAATCATCCTCTAGCTTTGAGGAAAGGGAGGGATTACCAATTGAAGAATTTCCCAAAGTCAAAGAGATTTTTATCCAAGGAGATTGGACGAGTCCTAATGAAGATCACACAGTAAATGATACTAACACAATCAACGATACCTCAATTTCACCACAAACACCTCCATTGAGGTCTCCCAGAAGTGATAAAAATGTTGATGAGTCTCCTCCTCATCAGTTGCATTCAAAATCACAAAATCCTAATACTAATGTAACAAGACCTGATTTGTTGCTTTCACAAAAAATCCAACCCCCACCGGATCAAATTAGAGCTCCTCTATCCCCACCAACTCCTCCAAAGAATGAAACATTTGTAAGAGTTGGATCCCCTCTTTCTCCTCCAACTCCAAATGCTACAATGCCTACTACCACCCCACCTCCGCCGCCAACGCCACCACCCCCGGTTGGAGACCATTACGCTAACAATGGTTTTCCAACTTCATTGTGTATTGGTCGTGGAAATAATGACACCGGCAATCACACGATGCATTCAATGAGTAACACCAAAAAGTTAAAAACATTGCATTGGTTAAAATTATCTCGAGCGGTGAAAGGAAGTTTGTGGGCTGAGGCACAAAAATCTGGTGAAGCTTCCAAGACACCAGATATTGATATGTCTGAGCTTGAAAATCTCTTCTCAGCAATAACACCAAGTTTAGGCCAAGCAAAGAAATCAAAGATCCAAAACTTAGTTACGCCAAAATCTGATAAAGTGCAACTGATTGAACATACACGAGCATATAATTGTGAAATCCTTCTTTCAAAAGTGAAAGTCCCATTGAACGATTTAATGAGCTCAGTTTTAGCATTAGAAGAGTCAGCATTAGATATTGATCAAGTTGAGAACCTGATAAAGTTTTGTCCAACAAAGGAAGAGAAGCAAGTACTTAAGGATTATGACGGAGACAAGGAAAAGTTGGGGAGATGTGAACAGTTCTTCTTAGAGTTGATGAAAGTTCCAAGAGTAGAATCCAAGCTGAGAGTTTTTTCATTCAAGATTGAATTCAACACTCAGGCTTCTGACCTTAGAAATAACATCAATATTGTTAATGCTGCTGCAGAAGAGGCATGA 2148 0.3906 MAMPCKLFFRNPPDGLLEISDRVYVFNCCFNIRCDWRDESYEVYVNGIVGQFRENVPNASIMVCNFREENTKSKLDNIFSKHEINLMNYPCHHHGFPMLKLEAIHHFLNSCDSWLSHGQNKVLLMHCEHGGLPVLAFMLAALLIFLKQYQGEQRTLDMVYKQVRRDFLQSLTMVNPIPSQLRYLRYVSKTNMAFDWPSLDRTLRLDYIVMTFLPNFNGNGGCFPIFRIYGEDPFLVDKNPKVLYSTPKSPKNIQAYKQGECDDKIKVNINCRIQGDVLIESVNLDSDLENEQMIFQTMINTNFIRSNLLMLNREKIDILWDAKDRFPRDFKLEITFTEKDVGPKTDESSSSFEEREGLPIEEFPKVKEIFIQGDWTSPNEDHTVNDTNTINDTSISPQTPPLRSPRSDKNVDESPPHQLHSKSQNPNTNVTRPDLLLSQKIQPPPDQIRAPLSPPTPPKNETFVRVGSPLSPPTPNATMPTTTPPPPPTPPPPVGDHYANNGFPTSLCIGRGNNDTGNHTMHSMSNTKKLKTLHWLKLSRAVKGSLWAEAQKSGEASKTPDIDMSELENLFSAITPSLGQAKKSKIQNLVTPKSDKVQLIEHTRAYNCEILLSKVKVPLNDLMSSVLALEESALDIDQVENLIKFCPTKEEKQVLKDYDGDKEKLGRCEQFFLELMKVPRVESKLRVFSFKIEFNTQASDLRNNINIVNAAAEEA 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02170 715 PANTHER FORMIN-J 1 714 - -
Aip03g02170 715 SUPERFAMILY Formin homology 2 domain (FH2 domain) 484 714 - -
Aip03g02170 715 MobiDBLite consensus disorder prediction 374 518 - -
Aip03g02170 715 Gene3D Protein tyrosine phosphatase superfamily 14 194 IPR029021 -
Aip03g02170 715 Gene3D Formin, FH2 domain 518 715 IPR042201 -
Aip03g02170 715 ProSiteProfiles Formin homology-2 (FH2) domain profile. 520 715 IPR015425 -
Aip03g02170 715 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Aip03g02170 715 Pfam Formin Homology 2 Domain 525 714 IPR015425 -
Aip03g02170 715 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 338 IPR035892 -
Aip03g02170 715 Pfam C2 domain of PTEN tumour-suppressor protein 201 338 IPR014020 -
Aip03g02170 715 MobiDBLite consensus disorder prediction 417 436 - -
Aip03g02170 715 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Aip03g02170 715 MobiDBLite consensus disorder prediction 473 497 - -
Aip03g02170 715 MobiDBLite consensus disorder prediction 376 405 - -
Aip03g02170 715 SMART PTEN_C2_2 198 338 IPR014020 -
Aip03g02170 715 Gene3D - 203 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02170 Aip-Chr3 32911929 32917931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02170 465 714 Protein tyrosine phosphatase (PTP) family AT5G58160 59.600 4.95e-80 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02170 - - ahf:112775940 1331.62