Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02169 ATGCATTATCTTTGTAAGGTTTTGGAAAATAAGCTTCCAGAAGTTTTAGACTTCACAAATGATCTTCCGAATTTAGAGCCAGCAACAAAGATCCAAATGAACTTTCTTGCAGAGGAGATGCAAGCTGTAAGTAAAGGATTAGAAAAAGTTGAGCATGAACTACTAACCTCAGAAAAGGATGGTTCTATATCAGAAATTTTCTGCAAGGGTAGGAATGTGGATGCCTTAATTATTTATTTTGGAGAAGATCCATCTCGCTGCACTTTTGAGCAAGTTGTCACAACTTTGCACAACTTCACTGGAATGTTTTGTAAAGCCCAGGAAGAGCACTTCAAGGAGCTTGAGCTTGAAATGAAGAAAACTAAAGAAAAAGATAAAAAGAAATACAAAAAGATAAAAAGAAATACAAATCAAAACTGA 420 0.3476 MHYLCKVLENKLPEVLDFTNDLPNLEPATKIQMNFLAEEMQAVSKGLEKVEHELLTSEKDGSISEIFCKGRNVDALIIYFGEDPSRCTFEQVVTTLHNFTGMFCKAQEEHFKELELEMKKTKEKDKKKYKKIKRNTNQN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02169 139 Coils Coil 33 53 - -
Aip03g02169 139 Pfam Formin Homology 2 Domain 1 68 IPR015425 -
Aip03g02169 139 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 139 IPR015425 -
Aip03g02169 139 Coils Coil 104 124 - -
Aip03g02169 139 PANTHER FORMIN-J 1 135 - -
Aip03g02169 139 PANTHER FORMIN-LIKE PROTEIN 1 135 - -
Aip03g02169 139 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 126 - -
Aip03g02169 139 Gene3D Formin, FH2 domain 70 138 IPR042201 -
Aip03g02169 139 Gene3D Formin, FH2 domain 1 69 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02169 Aip-Chr3 32894209 32901547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02169 1 128 Protein tyrosine phosphatase (PTP) family AT5G58160 55.921 5.41e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02169 - - ahf:112775940 212.231