Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02154 ATGGAGATTGTAAAATTCTTGTACTTGAATCTTCTCGCGACTTTCACATTCTCAGTGGTTTTAGCAATGGACCCTTATTCAGAGGCACTCCTGGGCCTGAAATCTGAGCTTGTAGATGATGATAACACACTGCATGATTGGAAAGTACCCTCTCAACAAGGGAACTCAACAACAGAATCCTATGCATGTTCTTGGACAGGTATCAAGTGTAACAACGACTCAACAGTTGTAACCTCCATAGACCTCTCAATGAAGAAACTCGGTGGCGTAATCTCAGGGAAACAATTCACCATCTTCACAAAGCTTGTTGATCTCAACCTCAGCTACAACTTCTTCTCTGGCCAGCTTCCAGTGCAAATTTTCAACCTCAAAACCCTGAAAAGCCTTGATATCAGCAGAAACAACTTCTCTGGTCACTTTCCAAATGGAATTTCCAGCCTCCAAAATCTTCTTGTACTTGATGCCTTTAGCAACAGCTTTTCAGGTCCATTGCCTGCAGAACTTTCGCAGCTACAGAATCTCAAGGTTCTTAATCTAGCTGGGAGTTACTTCAGTGGACCAATTCCATCTGAGTATGGTTCTTTCAGAAGCATTGAGTTTCTTCATCTTGCAGGGAATTCTCTCACAGGGAATATTCCTTCAGAACTTGGAAACCTCAAAACAGTGACCCATATGGAGATTGGTTACAACAATTATGATAGTCTTATACCGCCACAATTGGGTAACATGAGTCAGATTCAGTATCTTGACATAGCAGGTGCAAATCTATCAGGCCCCATACCAAAGCAACTCTCCAACCTCACCAGTTTGCAATCACTATTCCTGTTCCGGAACCAGCTCACAGGATCAATACCAAGTGAGTTGGGCAATATCAAAATTCTCACAAATTTAGATTTATCTGATAACTTCCTTTCAGGGTCTATTCCAGAGAGCTTTTCAGAGTTAAAGAACCTAAGACTGCTGAGTCTCATGTACAATGACATGACTGGCAATGTTCCACAAGGCATAGGTGGACTTCCGTCCTTGGAAACCCTTCTCATTTGGAACAACCGGTTCTCCGGATTACTTCCACAGAGCCTGGGGAGCAACTCTAAACTCAAGTGGGTGGATGCATCCACAAACAATTTGGTTGGCAGCATTCCACCGGACATTTGTGCAAGTGGAGAGCTGTTTAAGTTGATCTTGTTCTCAAACAAATTCACAGGAGGTCTCTCCCCTCTCTCTGATTGTTCTTCCCTTGTTCGCCTTCGCCTCGAAGATAACTCATTCTCCGGAAGGATCCCTCTCAGATTCAGCCATCTTCCTGATGTTTCATACGTTGACCTGTCCCACAACAATTTTGTTGGTGGGATTCCCTCCGATATTTCTCAAGCATATCAACTTCGGTATTTCAATGTATCTTATAATCCACGATTAGGAGGCACCATCCCCGCACGACTATGGTCTTTGCCCATACTTCAAAACTTTTCATCATCTTCTTGCGGTATTTCAGGTGATCTTCCTCAGTTTGAGTCCTGGAAGTCATTCAAATTGATGGGTAGCAGTGCATTTGTTGGGAATTCTGAGCTTTGTGGAGCACCACTTCGACCATGTCCTGGTTCAGTTGGAATATTGGGGAGCAAAGGAACATGGAGGCTTACCCGTATTCTGCTACTCTGTTTAGGGTCGTTAGTAATCCTTCTAGGAGTCGCTTTTGGAACACTTTATTTAAGAAGAGGGATCAAAAGTCAATGGAAGATGGTCTCATTTGCTGGACTCCCACAGTTCACAGCAAATGATATTTTGACAAGCTTCAGTGGCACAAAAACAACAGAAGTTCCATCACCATCACCACCTTTGGTTTCAAAGGTGGTTCTCCCTACAGGGATAACAGTCGTAGTTAAGAAGATTGAATGGGAACAGAGGAGCATCAAGGTCATGTCGGAATTCATAATTCGCCTTGGAAATGCGAGGCACAAGAACTTGATCAGATTATTGGGGCTATGCCACAATAATCAGTTAGTCTATCTTCTGTATGATTACGTGCCCAACGGGAATTTGGCTGAAAAAATTGGAAGGAAGTGGGACTGGGCAGCTAAGTTCAGAACTGTGGTTGGAATCGCAAGGGGACTAAGATTCCTTCACCATGACTGTTACCCAGCCATACCCCATGGAGACTTGAAATCAAGCAACGTTGTGTTTGATGAAAATATGGAACCCCGTTTGGCTGAATTTGGGTTCAAACATCTGTTAAGGTTGACCAACGGCTCATCTCCTGCTACAACCAAGTGGGAAACAGAATATAATGAAGCCGTGAAAGAGGAACTCAGAATGGATGTCTACCAATTCGGAGAGATGATTCTGGAAATTTTAACTGGAGGAAGGTTGACTAATGCAGCAGCTACCATACAAAACAAACCATGGCATGTTCTTCTCAGAGAAATTTACGACGAGAACGAAGTCAGTTCCGCCAATACAATGCAGGAGATCAAACTGGTTCTCGAGGTTGCTATGCTTTGCACTAGCAGCAGGTCATATGATCAACCGTCGATGGAAGATGCTCTGAAGCTTTTGTCAGGGATCAAACCTATAGAAGATGGCAGAGCTTAA 2589 0.4349 MEIVKFLYLNLLATFTFSVVLAMDPYSEALLGLKSELVDDDNTLHDWKVPSQQGNSTTESYACSWTGIKCNNDSTVVTSIDLSMKKLGGVISGKQFTIFTKLVDLNLSYNFFSGQLPVQIFNLKTLKSLDISRNNFSGHFPNGISSLQNLLVLDAFSNSFSGPLPAELSQLQNLKVLNLAGSYFSGPIPSEYGSFRSIEFLHLAGNSLTGNIPSELGNLKTVTHMEIGYNNYDSLIPPQLGNMSQIQYLDIAGANLSGPIPKQLSNLTSLQSLFLFRNQLTGSIPSELGNIKILTNLDLSDNFLSGSIPESFSELKNLRLLSLMYNDMTGNVPQGIGGLPSLETLLIWNNRFSGLLPQSLGSNSKLKWVDASTNNLVGSIPPDICASGELFKLILFSNKFTGGLSPLSDCSSLVRLRLEDNSFSGRIPLRFSHLPDVSYVDLSHNNFVGGIPSDISQAYQLRYFNVSYNPRLGGTIPARLWSLPILQNFSSSSCGISGDLPQFESWKSFKLMGSSAFVGNSELCGAPLRPCPGSVGILGSKGTWRLTRILLLCLGSLVILLGVAFGTLYLRRGIKSQWKMVSFAGLPQFTANDILTSFSGTKTTEVPSPSPPLVSKVVLPTGITVVVKKIEWEQRSIKVMSEFIIRLGNARHKNLIRLLGLCHNNQLVYLLYDYVPNGNLAEKIGRKWDWAAKFRTVVGIARGLRFLHHDCYPAIPHGDLKSSNVVFDENMEPRLAEFGFKHLLRLTNGSSPATTKWETEYNEAVKEELRMDVYQFGEMILEILTGGRLTNAAATIQNKPWHVLLREIYDENEVSSANTMQEIKLVLEVAMLCTSSRSYDQPSMEDALKLLSGIKPIEDGRA 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02154 862 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 507 856 - -
Aip03g02154 862 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 5 509 - -
Aip03g02154 862 SMART serkin_6 555 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02154 862 SUPERFAMILY RNI-like 79 401 - -
Aip03g02154 862 Pfam Protein tyrosine and serine/threonine kinase 622 847 IPR001245 GO:0004672|GO:0006468
Aip03g02154 862 ProSiteProfiles Protein kinase domain profile. 554 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02154 862 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Aip03g02154 862 PANTHER UNNAMED PRODUCT 507 856 - -
Aip03g02154 862 PANTHER UNNAMED PRODUCT 5 509 - -
Aip03g02154 862 Gene3D Ribonuclease Inhibitor 244 534 IPR032675 -
Aip03g02154 862 Gene3D Transferase(Phosphotransferase) domain 1 675 859 - -
Aip03g02154 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Aip03g02154 862 SUPERFAMILY L domain-like 362 510 - -
Aip03g02154 862 Gene3D Phosphorylase Kinase; domain 1 611 674 - -
Aip03g02154 862 Gene3D Ribonuclease Inhibitor 25 243 IPR032675 -
Aip03g02154 862 SUPERFAMILY Protein kinase-like (PK-like) 614 851 IPR011009 -
Aip03g02154 862 Pfam Leucine Rich Repeat 294 315 IPR001611 GO:0005515
Aip03g02154 862 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02154 Aip-Chr3 32234667 32238114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02154 2 852 Receptor kinase-like Gene Family AT5G51350 53.974 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip03g02154 PK_Tyr_Ser-Thr 9.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02154 - - dcr:108219880 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02154 03 32234667 32238114 Aip03g02154 03 32234667 32238114 ECH