Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02131 ATGATAGACGTGTTTGCAAGGCATTTGCCTCACTCATCCTTGCAAATCGCGCATTGGTTATGCTCTGAGTTCAGCAACTCGTCGTCTACTGTCACCGTCAGAAGATTCTTCATGGTGGTCTTCGGTGCCGGCGGGGTCCTGGTGTGGATCCAGAGGAACTTGAGAAGATGCGAAGATTTCGGAGGTCGATGGTTGTGGAGGAGGCGATGGCGGAGGATAGCAGGAAAGGGAGGAAGGACAAAGGATGGAAGGGGAGTTGAGCATCTATCGGGGGAAGGATCGGGGCCAAAACTGAAGGAGATTAGTGGGCCTAAGAAGAGCAAATCCCTAGAGGAAATAGTGTCGGCGGCTAAGGATTGGGTAGGTCTAAACTGGGGAGAAAGTTATTTGGAGTGGAGGTCGTTCGTCACCGGTGGTGGGTGGAGCTCGTCGCGGCAGGGCCAACCGGTCCGTGGTGTGGTGGTCGTTGTTGTCACTTTGCTTATCCGATCAGTTAAGTTCTCAGCTACCATCGCCGTCGGTAGTCATCCGGGCAATTGGCAAGTGGATGCTGTGAGGATGTTGGAATCATGTTGGATAGTAGATGAGGTAATAATGGCATCAAGTAGCAAGTTTTGGAAGGATGCGTGTATGTGGAATGAGCCTCTTGCGGATTTCTGGATGGAGGGCAATGGTGGTGTGTCGAATGCACAGGACACAATGTTTGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAAGGAAGGGGGGCTTCAATGTTGCCCGGATTTTTGGGTTTGGATGGGTTGCGAGCAGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCAGGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCACGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATCGTGCGGTATACTTTTGTTTGTAATAGGCAAAGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTCGTTACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGACGGTAGTGGGAGGTGGTATGTTTCGCGTTTTGTCGAGGAGCATAACCACAAACTTGCGTATGGAAAGCTTGTTGATTATTTTCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAAGGAGATTAGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTGGGGGGTTTTAATCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGATGAAGATTATGGGATTTTCGGCGATGTGCTAGCATTCGACGCTACGTATGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTTGGAACAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCGGTCATCACGGATGGCGACCCGGCCATGCGGATAGCAATCCAGTCTGTATTTCCTGATGCACATCATCGGTTGTATGCCTGA 1623 0.4917 MIDVFARHLPHSSLQIAHWLCSEFSNSSSTVTVRRFFMVVFGAGGVLVWIQRNLRRCEDFGGRWLWRRRWRRIAGKGGRTKDGRGVEHLSGEGSGPKLKEISGPKKSKSLEEIVSAAKDWVGLNWGESYLEWRSFVTGGGWSSSRQGQPVRGVVVVVVTLLIRSVKFSATIAVGSHPGNWQVDAVRMLESCWIVDEVIMASSSKFWKDACMWNEPLADFWMEGNGGVSNAQDTMFDTRVEEDAELSDWEGRGASMLPGFLGLDGLRAEDVLEMEFSSPQEAGGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQRFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKDGSGRWYVSRFVEEHNHKLAYGKLVDYFRSHRKISEVEVAQLTSMKEIRISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIQSVFPDAHHRLYA 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02131 540 Pfam MULE transposase domain 452 538 IPR018289 -
Aip03g02131 540 Pfam FAR1 DNA-binding domain 284 373 IPR004330 -
Aip03g02131 540 MobiDBLite consensus disorder prediction 77 103 - -
Aip03g02131 540 PANTHER OS02G0262500 PROTEIN 269 430 - -
Aip03g02131 540 PANTHER OS02G0262500 PROTEIN 445 539 - -
Aip03g02131 540 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 269 430 IPR031052 GO:0006355
Aip03g02131 540 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 445 539 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02131 Aip-Chr3 31329901 31336239 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02131 FAR1 7.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02131 - - aip:110269425 747.658