Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02127 ATGGCTGTAACCGACCGGTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCCCAAGAGCGTGGTAACCGTGTGGTCCACTATTACCTGAAGGATTCTGATGGGGAATCCATACTTGCTGTTGTGGGCACTGAGAGGAGTGTTAGACACATGTTCTATGTTGTTGCCGATGAGTTTTTGGAAATTTGTGGGAAGGAAGGTTCTGTTCCTGCCGGTTTCAAATGGAGATCTAGAAGAGAGGTTGTTGATTGGCTGACGTCAACACTTTCAAAGCAGCATCTTCAAGGAGATAGAAGTGGATCACCTAGTCATTCTTCAGGACATGCTTATGATACCACAAATGGTAGTGTCAATGAAATTACTGGTCTTCCTGCCCCGATAGCGAATGGCAAGGCATCTCTTGCTCAGGGATTTCTAACCCGAAACTCCAAATTATCCAAGTCTGACATTGTTTGGTCTGGAGTGGCGTGGACGTGCGGCAAGCAGCTTAAACATTATCATGCTTTTTGCAGGAATGGCATCAAAATAATTGTTCAATCATTTGTTTTTGTCATGGGCAAGGGAGAGAATCATTATGTTGCTTATTTAGAGGATATGTATGAAGATAGGAGGGGGCAGAAAAAGGTCAAAGCGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTGATTCCCATACGAAATCCACATCCTCGGGAAGTTTTCATCACACCATATTCTCAAGTCATTAGTGCAGAGTGTATTGATGGTCCTGCCGCGGTCTTAAGTCGTGAACATTATGAAAAATGCATGCCTTGCTTTTCCCCAACTTCATCTGATAGAATACATATGTGCTTTAGGCAATTTAGGAGCAACAAAGTCAAACCCTTTGACTTGAGTAAACTGCGTGGCTACTATGATCAACCAATTCTTTCTTGCTTGCAATTTGATTCTATGCTGAACCCCAAGGGAAATAGCCTAGCAGGAGGAGATGAAGAGTTGAGTGCAGGTGAAAATGTAAAGCTCAGAGCCAAGAGAAGGGATAGGGGAACTCCTCAGTCTTTGATGGGTCGACAAGGAGTTAGGAAGTTAGTTAGGAGTCAGCAAATGATGGTATACAAAAACTCTCAGGGTGTAAATAATTCTAGGACAGATAGGAAATTGTTTTCTCAGAAGGAAGTTGAATCTCAACCTTGGTATAATGTCACATACAAGATTGATGACAAGATAGAGGTCCTCTGTCAGGATAGTGGTATCAGAGGCTGCTGGTTCAGGTGTACGGTTGTGCAGGTATCTCGGAAAGAGATGAAAGCCCAATATGATGATATTCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTACTTTCAAGTTGGCCATGCCAGATAAACTTGGGATGAGACATCCTGGCCGATCAACAATCAGGCCAGCTCCTCCAACTTCCAACGATCAAGAATTGGTTATTGGGGTTGGAACTGCAATTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGAGTTGTAACTGGAACTGATAACTATGTTGATGATAATGTGCAAGCATACTTTCCTGGTGAACGGTTGCTAATGAAAGTAAGCAAGAAAGATCTAAGAATATCTAGAGATTGGTCCGGGGACAAGTGGATTGGTATTAAGCCGAAGCTCGATATAACCTCAACTATATTCGACATAAACGGCGTTAACACGAAGCATTCCACATCCCCAGCTAAAGACGGGGACTCTGTTGGTGCTGCAAATTCATGTGATGAAGTTCCGGCAAGTGACGAGACTATTAATGAACCAGATTTTGCTGAAGAAAAGGTTGAGGGTGTTGCTGAAGATGGAGATAACAATGATGATGATGGTGAAAATGATAATAATAATCTTTTGTCAGAAAAAGATACTCAAGCAGATAATAATGTGATTGAGTTGAATAGCATTGGTAATGAAAATAATGATGATGATTCTAATAAGGACAGTGATGACAATGTTGATAACAAGGACCGCGAAAAAAATAACGATAACAAGGAGACGGAGGCGTTTGGGGCTTCCGTGGCGGACGGTAAAGCCGGCGAACCCGTGGAAATGGCTGTATAA 2079 0.4291 MAVTDRCFVEWKEQFVSQERGNRVVHYYLKDSDGESILAVVGTERSVRHMFYVVADEFLEICGKEGSVPAGFKWRSRREVVDWLTSTLSKQHLQGDRSGSPSHSSGHAYDTTNGSVNEITGLPAPIANGKASLAQGFLTRNSKLSKSDIVWSGVAWTCGKQLKHYHAFCRNGIKIIVQSFVFVMGKGENHYVAYLEDMYEDRRGQKKVKARWFHHNQEVKGVIPIRNPHPREVFITPYSQVISAECIDGPAAVLSREHYEKCMPCFSPTSSDRIHMCFRQFRSNKVKPFDLSKLRGYYDQPILSCLQFDSMLNPKGNSLAGGDEELSAGENVKLRAKRRDRGTPQSLMGRQGVRKLVRSQQMMVYKNSQGVNNSRTDRKLFSQKEVESQPWYNVTYKIDDKIEVLCQDSGIRGCWFRCTVVQVSRKEMKAQYDDIQDEDGSGNLEEWIPTFKLAMPDKLGMRHPGRSTIRPAPPTSNDQELVIGVGTAIDAWWSDGWWEGVVTGTDNYVDDNVQAYFPGERLLMKVSKKDLRISRDWSGDKWIGIKPKLDITSTIFDINGVNTKHSTSPAKDGDSVGAANSCDEVPASDETINEPDFAEEKVEGVAEDGDNNDDDGENDNNNLLSEKDTQADNNVIELNSIGNENNDDDSNKDSDDNVDNKDREKNNDNKETEAFGASVADGKAGEPVEMAV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02127 692 CDD BAH_plant_1 168 297 - -
Aip03g02127 692 MobiDBLite consensus disorder prediction 562 692 - -
Aip03g02127 692 Pfam BAH domain 177 277 IPR001025 GO:0003682
Aip03g02127 692 PANTHER OS07G0607300 PROTEIN 4 668 - -
Aip03g02127 692 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 668 - -
Aip03g02127 692 Pfam Agenet domain 399 474 IPR008395 -
Aip03g02127 692 MobiDBLite consensus disorder prediction 623 645 - -
Aip03g02127 692 Gene3D - 140 297 IPR043151 -
Aip03g02127 692 MobiDBLite consensus disorder prediction 654 671 - -
Aip03g02127 692 SMART BAH_4 173 292 IPR001025 GO:0003682
Aip03g02127 692 ProSiteProfiles BAH domain profile. 173 292 IPR001025 GO:0003682
Aip03g02127 692 SMART agenet_At_2 481 539 IPR014002 -
Aip03g02127 692 SMART agenet_At_2 394 459 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02127 Aip-Chr3 31275047 31280423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02127 408 537 PHD Transcription Factor Family AT5G58610 29.323 3.73e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02127 - - gmx:100306240 913.679