Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02124 ATGAATGAAATCGAGATCTTAAGACCCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCTGGTGAGCATAACGAACTCTTTCTAGTCTACGAGTACGTCCCCAATGGCACTCTCTCTAGACATATTCATGGAGGTAAAATTGAAAAGCTACCATGGCTTACTAGATTGAATATTGCCATAGAAACTGCAACTGCATTGGCATCATATCTTCATGATTCAGGTATCATACACCGTGATGTAAAAGGAAGTAATATCCTCTTGGATGAAAATTTTTCTGTTAAAGTTGCAGATTTCGGACTCTCACGGTCCCTACCAGATTATATTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGAAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTGAACCTGCATTCTGGAGGGAAGTCCCACAAGGCGAGGCGGTTGGCCTTGCTAAGTTTGCAATAATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAATGGAAATGGTAGCAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAATTTAG 738 0.4214 MNEIEILRPLHHRNLVSLYGRSSGEHNELFLVYEYVPNGTLSRHIHGGKIEKLPWLTRLNIAIETATALASYLHDSGIIHRDVKGSNILLDENFSVKVADFGLSRSLPDYITHVSTAPAGTNAYMDPKYFQTGRVSYRSDVYSFGVVLFELISSEPAFWREVPQGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVMEMVAAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQII 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02124 245 SMART serkin_6 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02124 245 Pfam Protein kinase domain 2 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02124 245 Gene3D Transferase(Phosphotransferase) domain 1 37 240 - -
Aip03g02124 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Aip03g02124 245 SUPERFAMILY Protein kinase-like (PK-like) 1 235 IPR011009 -
Aip03g02124 245 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 244 - -
Aip03g02124 245 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Aip03g02124 245 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02124 245 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 244 IPR044652 -
Aip03g02124 245 PIRSF ILK 193 243 - -
Aip03g02124 245 PIRSF ILK 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02124 Aip-Chr3 31200393 31201130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02124 1 235 Receptor kinase-like Gene Family AT1G25390 55.882 1.19e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip03g02124 Pkinase 7.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02124 - - gsj:114418636 328.946