Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02122 ATGCCAATTCTCTCATTTGTATCTCAGTGTTTCTTCTTCCCTAATGGCAGTGGAAGTAAACACCACGCTTCACATCCAATTATTGGTTCTGAGGTTCAAACAAGCTGGGATGAACTGGTGGTTCCTGTGATCTCTGATGAGTTACCAAGTGATCATCATCAAAATCAATCACTTTTGTTGGTTGATTCTGTGTGCTGCCACATAAATGAGGTGTTTGAGTATTCTGAACTTGAAGAAGCCACCAATAGCTTTGACCCTAGTAGAGAACTTGGATCTGGAGGATATGGGACAGTTTATTTTGGAATACTCAAAGATGGACGTCATGTGGCCATAAAGCAGTTGCACAAAGACATGCTGAGGAGTTTAAGGTTGCATGACGAGAATTCCAAGAGCAATGATAGACTCACCAAGTTCTCAAACGAATTTGGCATCTTAACTCACTTGAAGCATGAAAATCTTGTCCAGCTATATGGCTGCACCTCTCCTCAGAGCCATGAAGTACTGCTTGTGCAAGAGTACATTCCCAATGGAACCGTTGCAGATCATCTTCTCAACAGGAGCTCTCCTCCGTGCAACATTCTGCTTGACATAAATCTGAATGCTAAAGTTGCAGACTTTGGATTATCGCGCCTTTTCCCAGAAGGTGTTACTCATGTTTCCACTGATCCTGCTGGGACTCCGGGTTATGTTGATCCAGAGTACTATGAGCATTGCCATCTTTCTGATAAGAGCGATGTGTATAGCTTCGGAGTAATATTGCTTGAGCTGATAACATCCCTGCCGGCATATAGCGAGGACGATAAAGAGCCTTTTCTTTCCAACTTTGCCATGGTTAGAATCAGCTGTGGGAGACTCCAGAGTATTGTTGACCGAGATCTTGGATTTGAGTCAGATGATTGGAATACTAAAACAATTACCGCAGTGGCAAAGTTGGCATGTAAGTGTCTTCAGAGCGAAAGTAAATTGAGACCTTCCATGGAAGAGGTGTTGAATAGCCTTGTGAGAATTGAAAGTTGTTGA 1020 0.4284 MPILSFVSQCFFFPNGSGSKHHASHPIIGSEVQTSWDELVVPVISDELPSDHHQNQSLLLVDSVCCHINEVFEYSELEEATNSFDPSRELGSGGYGTVYFGILKDGRHVAIKQLHKDMLRSLRLHDENSKSNDRLTKFSNEFGILTHLKHENLVQLYGCTSPQSHEVLLVQEYIPNGTVADHLLNRSSPPCNILLDINLNAKVADFGLSRLFPEGVTHVSTDPAGTPGYVDPEYYEHCHLSDKSDVYSFGVILLELITSLPAYSEDDKEPFLSNFAMVRISCGRLQSIVDRDLGFESDDWNTKTITAVAKLACKCLQSESKLRPSMEEVLNSLVRIESC 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02122 339 SUPERFAMILY Protein kinase-like (PK-like) 68 335 IPR011009 -
Aip03g02122 339 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 192 338 IPR044652 -
Aip03g02122 339 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 47 185 IPR044652 -
Aip03g02122 339 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 192 338 - -
Aip03g02122 339 Gene3D Phosphorylase Kinase; domain 1 60 173 - -
Aip03g02122 339 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Aip03g02122 339 Pfam Protein kinase domain 190 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02122 339 Pfam Protein kinase domain 87 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02122 339 ProSiteProfiles Protein kinase domain profile. 84 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02122 339 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 47 185 - -
Aip03g02122 339 Gene3D Transferase(Phosphotransferase) domain 1 181 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02122 Aip-Chr3 31192019 31194027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02122 71 338 Receptor kinase-like Gene Family AT1G25390 45.574 1.06e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip03g02122 Pkinase 3.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02122 - - mtr:MTR_6g082700 365.54