Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g02116 | ATGGATCGTCACAGGTCAGAAGCACCACCATCTTCCCCTCCATTGAGTTTCTACCTAGCTGCTCTTACCATTGCATCGCTAATTTTCTTGTGCATTTATGGTTCTTCTTCTACCGTCATTTATGTGGTCATATTCGTCACGATTTGCATCGCGATTTGCGTCGTCAGCGTGTTTGTTTCAAGATTCATCCATGAGAGAAAACTGCTAGCAAATGTTGTACGGTTTGGTAACGTATCAATGGCATCAATTAGTAGCAGTGATTGTGCAATCTGTATAGAGAATTTTCAGAACGGAGAGGAATGCTTAGTTTTCCCAAATTGTGGCCATCTCTTTCATTTGAATTGTATCAACCATTGGATACAGGCCAATCCCACATGCCCAATTTGCCGTCATCGTATTCCATTAGCAACCACCGTTTTCACCGCCTAA | 429 | 0.4242 | MDRHRSEAPPSSPPLSFYLAALTIASLIFLCIYGSSSTVIYVVIFVTICIAICVVSVFVSRFIHERKLLANVVRFGNVSMASISSSDCAICIENFQNGEECLVFPNCGHLFHLNCINHWIQANPTCPICRHRIPLATTVFTA | 142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g02116 | 142 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 130 | IPR001841 | - | |
Aip03g02116 | 142 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 62 | 134 | - | - | |
Aip03g02116 | 142 | Pfam | Ring finger domain | 87 | 130 | IPR001841 | - | |
Aip03g02116 | 142 | SUPERFAMILY | RING/U-box | 81 | 136 | - | - | |
Aip03g02116 | 142 | SMART | ring_2 | 88 | 129 | IPR001841 | - | |
Aip03g02116 | 142 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED | 62 | 134 | - | - | |
Aip03g02116 | 142 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 136 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g02116 | Aip-Chr3 | 31129850 | 31130278 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g02116 | 55 | 130 | C3H Transcription Factor Family | AT2G27940 | 38.272 | 6.17e-15 | 67.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g02116 | - | - | aip:107632916 | 288.115 |