Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02113 ATGAACAACATAAATCACACGCCGATATCGACATCAACCAATCATGAATCGACGATGCCAGACCCAGAAGACGGGCTTTTGAATGAGGAGACACTTTTTGACATGAGCATCTTAGGGGACGAACCAGGATTTCCGAATATGACGCAGACAGACATAGAGCCTCAAGCTGCTCAGGTACCAAGTCATGTTAGCGTTGAAGATGTGCTGAAGATGGAGTTCTTCACCCCTAGGGAAGCAAGAGAATTCTACACGAGTTATAGTAGGCTAAAAGGTTTTGCAATAAGGAGTAAGAGGGTAAAAAATGCCAAAGGAGAGATTGTTAGTTACACTTTTGTTTGCAACAGACAAGGGTTTAGGCACAAGAAGTGGTTAGATAAGCTGGATAGGAAAAGAGAGCACAAGCCTATAACGCGATGCGGGTGTGTAGCAGAGATGAGGATAAAAAAGAATCATAGTAATGGAAAATGGTTTGTTTCACAGTTTGTGGATGATCATAACCGCACCCTACTCTCTGAAAGGTTTATTGGATATCTGCCTTCACACAGGAATATGTCTGATGTAGAAATTGCTCAAATGAATAGCATGAGGGAAGTTGGGATAAGCATTCCAAAGATATACCAGTCATTTGCGATGCAGGTTGGCGGCTTTAACTTAGTAAGATTTACTAAGCAAGATATGCACAAGGAGGTTCAAAAGCAACGTGCTTTGCAGAACGGAGATATAAATGCCGCACTGCGTTTTTTTGAAGGTGCTGCCAGAAACGATGAGAAACTGTTTTAG 780 0.4205 MNNINHTPISTSTNHESTMPDPEDGLLNEETLFDMSILGDEPGFPNMTQTDIEPQAAQVPSHVSVEDVLKMEFFTPREAREFYTSYSRLKGFAIRSKRVKNAKGEIVSYTFVCNRQGFRHKKWLDKLDRKREHKPITRCGCVAEMRIKKNHSNGKWFVSQFVDDHNRTLLSERFIGYLPSHRNMSDVEIAQMNSMREVGISIPKIYQSFAMQVGGFNLVRFTKQDMHKEVQKQRALQNGDINAALRFFEGAARNDEKLF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02113 259 Pfam FAR1 DNA-binding domain 81 170 IPR004330 -
Aip03g02113 259 MobiDBLite consensus disorder prediction 1 19 - -
Aip03g02113 259 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 54 218 - -
Aip03g02113 259 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 54 218 - -
Aip03g02113 259 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02113 Aip-Chr3 31056795 31057690 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02113 FAR1 1.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02113 - - adu:107458091 444.121