Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02078 ATGGCAACTATATATACACTACTTCTTGTGTTCTCAAACAACACAAATCAATTGCATCTCCTCAAGTATCAGTACTCATATATTTCTCTCAATCAAATCCTTCAAGAAGAAGAAACAATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGTCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTTGGATATGATCATCCAACCGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTCTTAAGTCTCACTTCTCAGTTGGGTGGCCAATAA 384 0.388 MATIYTLLLVFSNNTNQLHLLKYQYSYISLNQILQEEETMAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQSSFQELLNQAEEEFGYDHPTGGLTIPCSEDEFLSLTSQLGGQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02078 127 Pfam Auxin responsive protein 49 122 IPR003676 GO:0009733
Aip03g02078 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 50 125 IPR003676 GO:0009733
Aip03g02078 127 PANTHER AUXIN-INDUCED PROTEIN 10A5 50 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02078 Aip-Chr3 30305070 30305453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02078 53 117 Calmodulin-binding Proteins AT3G43120 55.385 4.27e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02078 K14488 - gmx:100786685 143.28