Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02060 ATGATTTCAGCAAAGTCAACCAGGAGGAAAAAGAGAAAGAAGGAGAAGAAGACGACGGAGAGAGAAGTTGCCATTGCCACATTCTTCACCTTTAGCACCGTCTCTGCCTTGCGCTGCTGTTGTCGCTTCTACCTTGAACTGCTGGATCCGCCGCTGTTTAACAATATTAGTAACCTACAATTTATTATCAATTTTCAAGATTTTAGTCCCAATACCGGTGACGTCGAAGCAGTTGATCCTAAAATTAATTTGCACTTCAAAAAAGGAAGAATTTTTGTTGCTATGATTGAAGACTTGCTTGCAAAAGGAATGAGAAATGCTCAAAATGTAATCGACATTGATGATTTGGTGTTTAGCAGGAAGATTGACAATAATACTACAATGTGA 387 0.3876 MISAKSTRRKKRKKEKKTTEREVAIATFFTFSTVSALRCCCRFYLELLDPPLFNNISNLQFIINFQDFSPNTGDVEAVDPKINLHFKKGRIFVAMIEDLLAKGMRNAQNVIDIDDLVFSRKIDNNTTM 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02060 128 Pfam Pectinacetylesterase 67 111 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02060 Aip-Chr3 29799117 29800054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02060 51 111 Carbohydrate Esterase AT4G19420 44.262 1.23e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02060 K19882 - ini:109149791 68.1662