Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02053 ATGTGTGGTGTTGAGCAAGTTTTTAGAGTGCATGGGGGGAAAGCACCTAAGGCAGTCATCACTGATGGGGATAGGTCAATGCGGTTTGCCATTCAGGAAGTGTTTCCAGAAGCTCATCACAGGCTATGTGCGTGGCACCTATTAAAAAATGCAACTATGAATGTGTGCAAGCCTCGATTCATAACTCTGCTTAGAAATTACATGCTTGCCGACGTGGAGGTGGAGGAGTTTGTGAGGCAATGGGAGGCAATGATGGATGAGTGTCTTGTCAGGGAAGTAGAGTGGGTAAAGGATTTATACACGAAGAAGATGGCATGGGCTACCGCTTACATACGCAGGTTCTTTTATGCTGGCCTGAGGACGACATCACAATGTGAGTCACTGCATGCAAAGATGGGGAGGTTTGTGGAGAGGCGATACAGAATATTGGATTTCGTGACGAACTTCCAACGGTGTGTTGATTTCTTGATAGATAATGAGGAAGAGCTTGACTTCAGGTCATTGTATGGGAGCCCGATTCTTCAAACTCAGTTCCCGGGGCTAGAGAAGTCTGGATCGGAGAGTTTATGTGACACGAAGAGGGAGCACAAGGTTGTTACCCGCTGTGGATGTCAAGCAGAGATGAGGATAAAGCGAAAAGCCGAAAGCAACAATTGGTATGTGTGTCGTTTTGTTGATGAGCATAACCACGACCTTCTCCCGGCAAAGTTTGTGTCATACCTGCCAGCATATAGGAAATTATCAGATGTTGATAGAGCCCACATGGACAGTTTAAGGCAGGTTGGAATTTCAATTCCCAAAATTTACGAGTCTATTACTGCTCAGGCTGGGGGTTTTAACCTAGTTACGTTCACAAAGAGAGATATGTATAATGTGGTTAGGCGGCAACGTGCAATGCAAAGCAGCGATGTGAATGCCGTGTTACGGTATTTCAATGTTTGTGCCAGGAGAGATGGTAATATGTATTAG 969 0.4551 MCGVEQVFRVHGGKAPKAVITDGDRSMRFAIQEVFPEAHHRLCAWHLLKNATMNVCKPRFITLLRNYMLADVEVEEFVRQWEAMMDECLVREVEWVKDLYTKKMAWATAYIRRFFYAGLRTTSQCESLHAKMGRFVERRYRILDFVTNFQRCVDFLIDNEEELDFRSLYGSPILQTQFPGLEKSGSESLCDTKREHKVVTRCGCQAEMRIKRKAESNNWYVCRFVDEHNHDLLPAKFVSYLPAYRKLSDVDRAHMDSLRQVGISIPKIYESITAQAGGFNLVTFTKRDMYNVVRRQRAMQSSDVNAVLRYFNVCARRDGNMY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02053 322 Pfam MULE transposase domain 5 50 IPR018289 -
Aip03g02053 322 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 13 178 IPR031052 GO:0006355
Aip03g02053 322 PANTHER OS02G0262500 PROTEIN 185 322 - -
Aip03g02053 322 PANTHER OS02G0262500 PROTEIN 13 178 - -
Aip03g02053 322 Pfam FAR1 DNA-binding domain 190 234 IPR004330 -
Aip03g02053 322 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 185 322 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02053 Aip-Chr3 29480156 29481219 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02053 FAR1 2.7e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02053 - - aip:107632770 385.956