Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02031 ATGATTAGAGGAGCTCAGATATCACGTGAGCAACCACGTGATAGAGCTCCTCCATTTTTGTCCTCAGCTAATAGAGCTTCGGCATCCTGTGTCAATGAACCATTTTGTGCACCGCACAATGATAAAAGGCTCGCGCCATCAAGTACAGCTGATGACCCTCAAACTCCCACAGAACGCACAAAGACTCGGCATCGCGATGAAGAAGCAATTGCGAATATCGTGAGCCAAGATGGATCCTCTAAGAACCTTTCACAAAATAATTTGCTAGCACAAGTTCTTGGAAAGGAGCACCCAGGACGAGTTCGTGCCTTAGGTGTTGGACCATGTCCCACCCAAATTTTTGGTAATGCTGCTGCACAACCGTCGGGTTCTAGTTGCGACGATCTCGGATCTTCTTTCGGATCTCGGATCTTCTCCGGCGACGACCTCCTTCGGCGACATCTCCTCCCGTGCGCCTCCCTCAGCGTCTTCTCTGGTGACATCTTTCTATTGAAGATCTCTAAAATCCAAGCCATCACAAGCAGAACAAGCACAACTCTCCCATACTTCCTCAGTTCTTCTATAACTTCAAAGCATGAACCAGATGGCAGAGTAATCTTGGTTGAATTCGAAACCCTTCGGTTGTTGAATACATATGCTCCAAATAATGGGTGGAAAGAGGAACCAAACTCATTTCAAAGGAGAAGAAAATGGGACAAAAGGATTCTAGAATTTGTTACACAAAATTCAGACAAGCCTTTGATATGGTGTGGGGATCTAAATGGGAGAAGAGATATGGGAGCCCCTTTCACGTTCACACTTGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAGAAGCATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCTCCTCCCACAATTCTGCCCAAAGCAACTCTTCAATTTGATGTTGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGTGGTTTGTTTAAGAAGATACTTGTTGAGGGAGAGAAATGGGAGAACCCTAAGGATCCTGATGAAGTTCTGGTTAATTATGAGGCACGCCTTGAAGATGGAACACTTGTAAAGAAATCTGATGGGGTAGAGTTCACAGTAGAAGACGGTCACTTTTACCCTGCATTGTCAAAGGCCATCAAAACAATGAAGAAGGGACAAAAAGATAAGGAATCTTGGGACATAGAAACTCCAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGCACTGTTTAGAGCTGGTAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTATTAAGTTCATAGAATATGATACCAACTTCAGCATTAAAGAGAAGAAGAGTGCCAAGGACTTGAAGATTGCTTGCAATTTGAATGATGCAGCTTGCAAGTTGAAGTTGAAAGATTATAAACAAGCAGAGAAATTGTGTACAAAGGTTTTGGACCTTGAGAGCACAAATGTGAAAGCACTCTATAGAAGAGCACAAGCATATATCCAGTTAACTGACTTGGATTTGGCAGAATTTGATATCAAGAAAGCACTTGAGATTGACCCTAATAACAGAATTATCCTATTAACATTCTTCATTGATTTGTCAACTACAGCTTCAGTTGGATTGCCAGTAATGCATAATAGTAATCTGTACTCTGCATTATTATCGGTTTCTGATGATGATGATAGCAAGAAGGAGAGCATCACCGATCTTATTAATGATTCTCCTTACAAGATAGAGCAAGAAACAAAGATGTTGGAACAAGTTCCTGGGATGAAACTCACACAGGAGACCAAAAAACTAAGACATGCTTGTTTTAAAGTTAATTACAAAAGGAGAAAACTTTTGGCCTCCAAATCTTATTCATCATCACTTAGCTAA 1908 0.4151 MIRGAQISREQPRDRAPPFLSSANRASASCVNEPFCAPHNDKRLAPSSTADDPQTPTERTKTRHRDEEAIANIVSQDGSSKNLSQNNLLAQVLGKEHPGRVRALGVGPCPTQIFGNAAAQPSGSSCDDLGSSFGSRIFSGDDLLRRHLLPCASLSVFSGDIFLLKISKIQAITSRTSTTLPYFLSSSITSKHEPDGRVILVEFETLRLLNTYAPNNGWKEEPNSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNGRRDMGAPFTFTLGQGQVIKGWDEGIRSMKKGENALFTIPPELAYGESGSPPTILPKATLQFDVELLSWTSVKDICKDGGLFKKILVEGEKWENPKDPDEVLVNYEARLEDGTLVKKSDGVEFTVEDGHFYPALSKAIKTMKKGQKDKESWDIETPEKIEAAGKKKEEGNALFRAGKYAKASKRYEKAIKFIEYDTNFSIKEKKSAKDLKIACNLNDAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRAQAYIQLTDLDLAEFDIKKALEIDPNNRIILLTFFIDLSTTASVGLPVMHNSNLYSALLSVSDDDDSKKESITDLINDSPYKIEQETKMLEQVPGMKLTQETKKLRHACFKVNYKRRKLLASKSYSSSLS 635
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02031 635 Pfam Tetratricopeptide repeat 499 532 IPR001440 GO:0005515
Aip03g02031 635 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 352 400 IPR001179 GO:0003755
Aip03g02031 635 PANTHER PEPTIDYLPROLYL ISOMERASE 254 400 - -
Aip03g02031 635 SUPERFAMILY TPR-like 412 536 IPR011990 GO:0005515
Aip03g02031 635 Gene3D Tetratricopeptide repeat domain 403 539 IPR011990 GO:0005515
Aip03g02031 635 ProSiteProfiles TPR repeat profile. 499 532 IPR019734 GO:0005515
Aip03g02031 635 PANTHER PEPTIDYLPROLYL ISOMERASE 399 537 - -
Aip03g02031 635 MobiDBLite consensus disorder prediction 1 65 - -
Aip03g02031 635 SUPERFAMILY DNase I-like 190 265 IPR036691 -
Aip03g02031 635 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 253 324 IPR001179 GO:0003755
Aip03g02031 635 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 347 401 IPR001179 GO:0003755
Aip03g02031 635 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 255 321 IPR001179 GO:0003755
Aip03g02031 635 Gene3D - 326 402 IPR046357 GO:0003755
Aip03g02031 635 Gene3D - 238 325 IPR046357 GO:0003755
Aip03g02031 635 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 254 400 - -
Aip03g02031 635 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 399 537 - -
Aip03g02031 635 SUPERFAMILY FKBP-like 328 400 - -
Aip03g02031 635 SMART tpr_5 499 532 IPR019734 GO:0005515
Aip03g02031 635 SMART tpr_5 416 449 IPR019734 GO:0005515
Aip03g02031 635 SMART tpr_5 465 498 IPR019734 GO:0005515
Aip03g02031 635 SUPERFAMILY FKBP-like 260 329 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip03g02031 Aip-Chr3 29103501 29110700 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02031 265 537 Calmodulin-binding Proteins AT3G25230 49.383 5.09e-92 293
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02031 K09571 - vvi:100249097 266.544