Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02029 ATGACACCACGTTGGTCCTCTCTCCAAACTTCTCTCCCAGTTCCTATCCTCTACTTCCTGCTCCTCTCCCTCGGCATCGTTGTTTTGCCGGCAAATCCACTTGCCACGCGCTCTGATCTCACGCGCATCATCCACCTTAGCAAAGCTACCATCGCATTCGCCAATTCATCAGTGGCTAACAACCTTCCCGATGAGTTCCGTCACGGAACTGTCCTCATTGACTCGCCCGAGTTCGAATCGCTCATGACAGTTCTCATattgggaattgttaccatactgagaacctccagttctcataccatatattgttgttattttttagatgcaggtcgcaacccacctaagtaa 348 0.3879 MTPRWSSLQTSLPVPILYFLLLSLGIVVLPANPLATRSDLTRIIHLSKATIAFANSSVANNLPDEFRHGTVLIDSPEFESLMTVLILGIVTILRTSSSHTIYCCYFLDAGRNPPK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02029 115 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 11 86 - -
Aip03g02029 115 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 86 - -
Aip03g02029 115 Gene3D - 9 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02029 Aip-Chr3 28948846 28949193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02029 10 78 Monolignol Biosynthesis Gene Families AT5G63380 42.857 5.10e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02029 - K01904 ming:122079311 92.8189