Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02028 ATGACACCACTTTGGTCCTCTCTCCAAACTTCTCTCCACGTTCCTATCCTTTACTTCCTGCTCCTCTCCCTCGACATCGTTGTTTTGCCGGCAAATCCACTTGCCACGCGCTCTGATCTCACGCGCATCATCCACCTTAGCAAACCTACCATCGCATTCGCCACTTCATCAGTGGCTAACAACCTTCCCGATGAGTTCCGTCATGGAACCGTCCTCATTGACTCGCCCGAGTTCGAATCGCTCATGATAGCGAGTCGACCCGGCGCCAAACTCGAACAAGTGGAGGTGAGTCAGTCTGACGTGGTAGCTATTCTTTACTCTTCAGAAACCACAGGGAAGGTGAAGGGAGTGATGTTGACTCATAGGAACCTGATTGCAGAGGCTTGGTTTGTGAAGTTGGATAACCAAGTCAGTTCCAATCTGAAGCACGCCCTTCTTCTAGAAACTTCTTCGGGAAAGAGGAAGCAGCAGCAACATAGCAGCATCATCAAGAAAAATGATAGTTTAACCATTGGCATTCTTTCTTTTGAAGTAGCCAATGTCATGTCCAAAACGGTTCACCTTCACAAATTCCTTTTGGATTCTAAGATTTCGAGGCTCAGAATGAGATCTTGA 615 0.4748 MTPLWSSLQTSLHVPILYFLLLSLDIVVLPANPLATRSDLTRIIHLSKPTIAFATSSVANNLPDEFRHGTVLIDSPEFESLMIASRPGAKLEQVEVSQSDVVAILYSSETTGKVKGVMLTHRNLIAEAWFVKLDNQVSSNLKHALLLETSSGKRKQQQHSSIIKKNDSLTIGILSFEVANVMSKTVHLHKFLLDSKISRLRMRS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02028 204 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 128 - -
Aip03g02028 204 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 10 128 - -
Aip03g02028 204 Pfam Domain of unknown function (DUF3475) 173 202 IPR021864 GO:0045927
Aip03g02028 204 Gene3D - 121 130 - -
Aip03g02028 204 Gene3D - 8 120 - -
Aip03g02028 204 SUPERFAMILY Acetyl-CoA synthetase-like 9 140 - -
Aip03g02028 204 Pfam AMP-binding enzyme 9 134 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02028 Aip-Chr3 28937146 28937760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02028 10 126 Monolignol Biosynthesis Gene Families AT5G63380 49.580 1.64e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02028 - K01904 ming:122079311 140.584