Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01995 ATGTTGTTATCGGCTTCGCCATCTTCTTTGGCGAAGAGCTCTCTGGAAGAGATGCTTGATTCTCTTCGTCGGAAAGAGGAAGAGGAAGCAAAGCCGAAGGACTTGCCTCCGGCATTGCCGGCACGGCCGGCCTCCCGTGCACGGCTGCCTCCGGCGAGGCGGTCTTTGCCGAATAACTTTAAGGTCGGAGACGGCAGTAACGCCATGCCGGAGTGCTTGCCGAATGGGTTTGATTGTAAGAGAAAGGAAGATGAGCTGGGAGAGAAGAGAAGAAGTGATGGTTTTGGGAGCAAGAAGGTGAAGATGATGATGGATGCGGATTCCCCTTATTTAGCTTCGTCTGGGAAGGTTAGGGAATTGGAGGATGATAACATTTCTTACATTATCAAAAAGAAGCTTTGTGTCTGGTGTAGACAACCAAGTGGACTGTGGGAACTAGGTACGATACAGTCAACCTCGGGAGAGGAAGCATCTGTTTTACTCTCAAATGGAAATGTTATTAACGTGGCCAGGTCAGAGTTTGTACCAGCTAATCCTAAAATATTTGAGGGTGTAGACGATCTCATGAAGCTCTGTTATTTGAATGAGCCATCAGTTCTTCACAATATTAAGTTCAGACATTCTCAGGACATGATTTATACTAAAGCAGGGCCCATTTTAATTGCAGTCAATCCCTTCAAAGATCTCCAGATTTTTGGAAATGATCGTATTTCAGCTTATAAGCAGAAATTTACCAATAGTCCTCATGTTTTTGCTGTGGCTGATGAGGCTTTTACGAAGATGATGAGAGATGAAGCAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCAAAGATTGCTATGCAGTACTTAGCTGCTGTTGGTCGTAGTAATAGGGGTACAGAAGAAAAAATTCTTCAAACAAATCATGTGCTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGGAAGCTGATTGAAATTCATTTCAGCACAATGGGTAAAATCTATGGGGCTAAAGTTCAAACATTTTTGATAGAAAAGTCCAGAGTTGTTCAGCTGGCCAGTGGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATTTGGCCTTAAAGAGAGACTTAATCTTAGAGCAGCCAGCTATTATAAATATCTTAATCAGAGTGAATGCTTGATGATTGATGGCATTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTCGATATTGTCCAAATTTGCAAAGAGGACCAAGAGCTGATCTTTAAGGTGCTGGCTGCTATACTATGGCTGGGAAATATATCATTCAAAGTTGCAGACAGTGAGAATGACATTGAGGTTCTGGATGATGAAGCTGTTACCAGTGCTGCTCGGCTGATGGGTTGCAGCTCCCAGGCATTGAAGGCAGCATTATCTACCAAGAAAATCCAGCCTGAGAAGGATACTAATACAAAAAAATTGATATTGCAGCAGGCAATTCAAACGAGAGACGAAATTGCAAAATTTATGTATGAAAACTTGTTTAACTGGATTGTAGACCAAATCAACAGGTCACTTCAAGTGGGTAAAAGATGTACTGGGAAATCCATAAATATCTTGGATATTACTGGTTTTGAATCATTCCAGAAAAGTAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAAAGACTTCAACAGCATCTCAATCGGCATCTGTTTAAGCAAGAGCAGGAGGACTATGAGTCAGATGGCATTGAGTGGACTAAAATATATTTTAAGGACAATCAAGAGTGCTTGGATCTCTTTGAGAGGAAACCTCACAGTCTACTCTCCTTGTTGGATGAGGAATCAAATTTGCCTAAGGCTTCTGATCTAACGTTTGCAAACAAACTTAAGCAGCACTTGGGTACTAATCCTTGCTTCAAAGGGGAGAGAGGCAGGGCTTTCAGTGTTCGTCATTATGAAGGGGAGGTTCTGTATGATACGAATGGCTTTCTAGAAAAGAACAGAGATTTTATGCCTTCCGATTCCGTTCAATTCCTTGCATCATGTAAATGTGAACTGCTGCCATTGTTCTCCAAAATGTTTGATCAGTCTCTGAAGTGTTCAAATTCCTTCGGCACAGGTGCAGTGGATTCACAGGAGCAGAGTGTTTGTAAAAAGTTTAAGGGTCAATTGTTCAATTTGATTGACCAATTGGAGTGCACCACACCTCACTTCATTCGATGCATAAGGCCAAATACTAAGCAGCTGCCTGACATTTATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAACTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTCTGCTTTCTGAGGCCAACAAATATCAGGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAATTTAATATCCCTTCTGAGATGTACCAATTCGGCTATACTAAGTTGTATCTTCGAGCTGGGCAGACTGGTTCACTGGAGCTCAAGAGAAAACAGGTTTTGCAAGGAATAGTTGTGGTTCAAAAATACTTCCGTGGTTATCAAGCAAGGAGTTATTTCCAGGAACTTAAGAAAGGAGTGGCAACATTTCAATCATTTGTTCGTGGAGAAATTACAAGAAGGAAATTTGGTGTTATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCAATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACTCCAAATGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGACGGAAATCACTTGTTAAGATGCTGGAAGTGAAGGATATATCCAAAGAGCGGGTTCAGAACCTACCTTCACCATTAGCCCAACTACAAAGGCGAGTTGACAAGGCCGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGTGGGCTGAATATGAGGCAAAGATGAAATCAATGGAGGAAGCATGGCAAAAACAGAGAGCATCCTTGCAAATGAGTCTCGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGTGGCAATACTCAACCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTACCCTGGGATCTCGAACAGCTGTGAACACTCCAATAAAGTTTTCTAGCAATTTCGCTGTCTCTGATGGAGGCAGAGAGGCTAACGGGATCAGAGAAAGAGGGACAAGTGGTACTTTGAGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTCGACGACGAAGTTAAAGCTCTGAATGATGTTAAACCAGGGAACTCCACCACCACAAATTCCATTGAAGAATTTCGTAAACTTAAGCAGAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGCGAGACAAAAGCAAAGCTTCATGAAGCAGATAAAAGTCGGAGGACATGGTGGGGGAAATTAAAAAATTGA 3537 0.4153 MLLSASPSSLAKSSLEEMLDSLRRKEEEEAKPKDLPPALPARPASRARLPPARRSLPNNFKVGDGSNAMPECLPNGFDCKRKEDELGEKRRSDGFGSKKVKMMMDADSPYLASSGKVRELEDDNISYIIKKKLCVWCRQPSGLWELGTIQSTSGEEASVLLSNGNVINVARSEFVPANPKIFEGVDDLMKLCYLNEPSVLHNIKFRHSQDMIYTKAGPILIAVNPFKDLQIFGNDRISAYKQKFTNSPHVFAVADEAFTKMMRDEANQSIIISGESGSGKTETAKIAMQYLAAVGRSNRGTEEKILQTNHVLEAFGNAKTSRNENSSRFGKLIEIHFSTMGKIYGAKVQTFLIEKSRVVQLASGERSYHIFYQLCAGSSFGLKERLNLRAASYYKYLNQSECLMIDGIDDAKKFHQLMKALDIVQICKEDQELIFKVLAAILWLGNISFKVADSENDIEVLDDEAVTSAARLMGCSSQALKAALSTKKIQPEKDTNTKKLILQQAIQTRDEIAKFMYENLFNWIVDQINRSLQVGKRCTGKSINILDITGFESFQKSSFEQFCINYANERLQQHLNRHLFKQEQEDYESDGIEWTKIYFKDNQECLDLFERKPHSLLSLLDEESNLPKASDLTFANKLKQHLGTNPCFKGERGRAFSVRHYEGEVLYDTNGFLEKNRDFMPSDSVQFLASCKCELLPLFSKMFDQSLKCSNSFGTGAVDSQEQSVCKKFKGQLFNLIDQLECTTPHFIRCIRPNTKQLPDIYDEDLVLQQLKCSGILEVVRTSRAGYPTRMTHQEFSTRYGFLLSEANKYQDPLSTSVAILQQFNIPSEMYQFGYTKLYLRAGQTGSLELKRKQVLQGIVVVQKYFRGYQARSYFQELKKGVATFQSFVRGEITRRKFGVMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKSLVKMLEVKDISKERVQNLPSPLAQLQRRVDKAEEENAKLREQLKQSERKWAEYEAKMKSMEEAWQKQRASLQMSLVAARKSLASDSGNTQPTRNEVLSPRYYGSEDATLGSRTAVNTPIKFSSNFAVSDGGREANGIRERGTSGTLSSLMKEFDQRRQNFDDEVKALNDVKPGNSTTTNSIEEFRKLKQSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLKN 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01995 1178 MobiDBLite consensus disorder prediction 1 67 - -
Aip03g01995 1178 PANTHER MYOSIN-2 ISOFORM X1 132 1176 - -
Aip03g01995 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 904 IPR027417 -
Aip03g01995 1178 Pfam Myosin head (motor domain) 185 841 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 ProSiteProfiles Myosin motor domain profile. 183 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 SMART MYSc_2a 177 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 Coils Coil 975 1016 - -
Aip03g01995 1178 Gene3D - 366 422 - -
Aip03g01995 1178 Gene3D Myosin VI head, motor domain, U50 subdomain 423 531 - -
Aip03g01995 1178 ProSiteProfiles IQ motif profile. 857 884 IPR000048 GO:0005515
Aip03g01995 1178 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 130 179 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 Coils Coil 1103 1123 - -
Aip03g01995 1178 MobiDBLite consensus disorder prediction 1 15 - -
Aip03g01995 1178 PRINTS Myosin heavy chain signature 213 232 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 PRINTS Myosin heavy chain signature 267 292 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 PRINTS Myosin heavy chain signature 310 337 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 PRINTS Myosin heavy chain signature 542 570 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 PRINTS Myosin heavy chain signature 595 623 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g01995 1178 SMART iq_5 877 899 IPR000048 GO:0005515
Aip03g01995 1178 SMART iq_5 854 876 IPR000048 GO:0005515
Aip03g01995 1178 SMART iq_5 913 935 IPR000048 GO:0005515
Aip03g01995 1178 CDD MYSc_Myo8 197 841 IPR036022 -
Aip03g01995 1178 Gene3D Kinesin motor domain 182 786 IPR036961 -
Aip03g01995 1178 MobiDBLite consensus disorder prediction 17 35 - -
Aip03g01995 1178 Pfam IQ calmodulin-binding motif 859 876 IPR000048 GO:0005515
Aip03g01995 1178 Pfam IQ calmodulin-binding motif 916 933 IPR000048 GO:0005515
Aip03g01995 1178 Gene3D - 554 743 - -
Aip03g01995 1178 PANTHER MYOSIN 132 1176 - -
Aip03g01995 1178 ProSiteProfiles IQ motif profile. 914 942 IPR000048 GO:0005515
Aip03g01995 1178 Coils Coil 1148 1168 - -
Aip03g01995 1178 Gene3D - 787 854 - -
Aip03g01995 1178 ProSiteProfiles IQ motif profile. 878 906 IPR000048 GO:0005515
Aip03g01995 1178 Gene3D - 857 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01995 Aip-Chr3 28222776 28234442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01995 1 1175 Myosins gene family AT5G54280 57.514 0.0 1372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01995 K10357 - gmx:100801876 1521.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01995 03 28222776 28234442 Aip03g01995 03 28222776 28234442 ECH