Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01994 ATGGCAGCAACATTAATGGCAGCCACAGCTAGCTCTGGCACTGTCCTGAAATCAACCCCCTTCTTTGGTCAGACTAGGGGATCCAACGCTAACCCTCTTAGAGATGTTGTCTCTATGGGAACTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACACCTTCGTACTTGACTGGAGAGTTCCCAGGAGACTATGGTTGGGACACTGCTGGTTTGTCTGCTGATCCTGAAGCATTTGCCAGGAACAGGGCTCTTGAGGTTATCCATGGACGTTGGGCTATGCTGGGAGCACTAGGGTGCATCACCCCAGAAGTGCTAGAAAAGTGGGTCAGAGTGGACTTCAAGGAGCCAGTTTGGTTCAAAGCAGGAGCACAAATTTTCTCCGAAGGCGGCCTCGACTACTTGGGCAACCCAAATCTAGCCCATGCACAGAGCATCCTGGCAGTTCTTGGATTCCAAGTTGTCCTCATGGGCCTCGTCGAGGGCTTCCGCATCAACGGCCTCCCCGGCGTGGGCCAGGGCAACGACCTCTATCCTGGGGGACAGTACTTTGACCCTCTTGGACTTGCCGACGACCCTGTCACTTTCGCTGAGCTCAAGGTGAAGGAGATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTGCAAGCCATTGTCACTGGCAAAGGACCACTTGAGAACCTTTTGGATCACCTTGATAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGTGCCTGGTTCTTGA 810 0.516 MAATLMAATASSGTVLKSTPFFGQTRGSNANPLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLAHAQSILAVLGFQVVLMGLVEGFRINGLPGVGQGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01994 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 7 269 - -
Aip03g01994 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Aip03g01994 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 269 IPR001344 GO:0009765|GO:0016020
Aip03g01994 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Aip03g01994 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01994 Aip-Chr3 28220806 28222269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01994 14 268 Chloroplast and Mitochondria Gene Families AT2G05070 68.182 3.52e-122 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01994 K08914 - vvi:100260599 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01994 03 28220806 28222269 Aip03g01994 03 28220806 28222269 ECH