Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01976 ATGGGAAACTTCAAAATGTTACTTATTTTGTTATTTCTAGTATCCTACATGAGAGGCTCGACTTCTTTACACAATTTAGGAATGAGTGAATGTATTCGTGATGGTGGCGAGACTTTGCTTTCAGCTGATGCAAGTTTCGAACTGGGTTTCTTCAGCCCTGGAACTTCAACAAATCGATATTTGGGTGTCTGGTACACAGATGTATCAGGAAAGCAAACAGTTGTGTGGGTGGCCAACAGAGAAACACCACTCCACAACAAGTCAGGGATCCTCATGTTAAACGAAATGGGGATTCTTCAACTTCGCACCGGGGCAAACGCTACTATTCTTTGGTCGTCCAAGGTATCAGACGAAGCCTTTAATTTGAGTAATTCAACAGCAGAGCTCTTTGATTCAGGAAATCTTGTGGTGAAAAGTGGGCAGGATGAGGGCAGCTTCTTGTGGCAGAGTTTTGATTATCCCTGTGACACTTTGATGCCGGGAATGAAGCTCGGACTAAAATCTGGCATAGATAGATATTTGTCAAGCTGGAAAAGTACAGATGACCCTGCAGTGGGAGAATATTCCATCAAAATTGATCGTAAAGGGTATCCGCAACTAGTTCAGATGAAAGGATCCTTCATTAACGCTAGAGAGGGCTCATGGAATGGCATTTATTTCACTGGATATCCGAATCTGCAACAGAGCATTTTTAAACGAGAATTTGTATTCAGTGATAGAGAGGTGTATTATGAGTTTGATATACTTGATAGATCAATTTTCAAAATATTTAGAGCGACCCCTTCAGGTGGTTGGGAAAACATGGTATGGACAAGTCAAACTGCGGAAACTACTACGTCCGGGGGGCAGGATGCATGCGACAGTTATGCATTCTGCGGTTCGAATTCTGTATGCAACATTGGTGATAATGTTGCATCATGTGAATGCCTCAAAGGATATGTTCCCAAGTTTCCTCAACAATGGAATGTGTCATATTGGTCCAATGGTTGTGTTAGAAAGACTTCATCGACGTGTAATAACACACAAGGCTTCTTGAGGTACAAAGACATGAAATTGCCGGACACATCTTCTTCATGGTTTAATAACGCAATGAATCTTGAGGAATGTCAGAAGACATGCTTGAAAAATTGTTCTTGTACGGCTTATGCGAATTTGGATATTCGTAATGGAGGAACTGGTTGTCTGCTTTGGTTTGATCACCTTATTGACATTCGGCAATTCTCACAAGAGGGTCAAGACCTGTACATCAAAGTCCCTAGTTCTGAGTTAGCTAATGACCATGGAAACAAGAAGATAAAGACGGTAGCAATTGCTGTTGGAATGATTATTTTTGGATTAATCTGTTGGGTTACCATAATGCTAATTAAATATCCAGGGTTCGCAAGAAATATAAGGAAAAATAAACAAAGACAAGATGTTGATCTCCCAATATTTGATTTCTCAGTCTTAGCTAAAGCTACAGACAACTTTTCAAGCAACAAAAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGCTACTATAAATGGTCAAGAACTAGCAGTTAAAAGACTTTCAAAAAAGTCTGGCCAAGGATCAGAAGAATTCAAAAATGAGGTAGTGTTAATAGCCAAGCTTCAACATCGTAATCTTGTAAAACTTCTTGGTTGTTGCATTCAGGGGGAAGAAAAAATATTGGTCTATGAATACATGCCTAACAAAAGCTTGGATCACTTTGTTTTTGATGAAACAAGAAGAAAGGCCGTAGATTGGCTTAAGCGTTTTAACATTATTGGCGGCATTGCTCGAGGACTTCTTTATCTCCATCAAGATTCTAGACTAAAGATTATACATAGAGATCTTAAAACTAGTAATATTCTTTTGGATGCAAATTTAAATCCCAAAATATCAGATTTTGGCTTGGCTCGAACATTTTTTGGTGATCAAGTTGAGGCAAATACAAATAGAGTTGCTGGAACATAG 1965 0.3913 MGNFKMLLILLFLVSYMRGSTSLHNLGMSECIRDGGETLLSADASFELGFFSPGTSTNRYLGVWYTDVSGKQTVVWVANRETPLHNKSGILMLNEMGILQLRTGANATILWSSKVSDEAFNLSNSTAELFDSGNLVVKSGQDEGSFLWQSFDYPCDTLMPGMKLGLKSGIDRYLSSWKSTDDPAVGEYSIKIDRKGYPQLVQMKGSFINAREGSWNGIYFTGYPNLQQSIFKREFVFSDREVYYEFDILDRSIFKIFRATPSGGWENMVWTSQTAETTTSGGQDACDSYAFCGSNSVCNIGDNVASCECLKGYVPKFPQQWNVSYWSNGCVRKTSSTCNNTQGFLRYKDMKLPDTSSSWFNNAMNLEECQKTCLKNCSCTAYANLDIRNGGTGCLLWFDHLIDIRQFSQEGQDLYIKVPSSELANDHGNKKIKTVAIAVGMIIFGLICWVTIMLIKYPGFARNIRKNKQRQDVDLPIFDFSVLAKATDNFSSNKKLGEGGFGPVYKATINGQELAVKRLSKKSGQGSEEFKNEVVLIAKLQHRNLVKLLGCCIQGEEKILVYEYMPNKSLDHFVFDETRRKAVDWLKRFNIIGGIARGLLYLHQDSRLKIIHRDLKTSNILLDANLNPKISDFGLARTFFGDQVEANTNRVAGT 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01976 654 Gene3D Phosphorylase Kinase; domain 1 459 564 - -
Aip03g01976 654 Gene3D Hepatocyte Growth Factor 335 416 - -
Aip03g01976 654 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Aip03g01976 654 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Aip03g01976 654 Pfam Protein kinase domain 491 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01976 654 Gene3D - 24 151 IPR036426 -
Aip03g01976 654 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Aip03g01976 654 Pfam PAN-like domain 338 404 IPR003609 -
Aip03g01976 654 SMART serkin_6 490 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01976 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Aip03g01976 654 SMART blect_4 30 154 IPR001480 -
Aip03g01976 654 CDD PAN_AP_plant 334 419 - -
Aip03g01976 654 CDD B_lectin 35 154 IPR001480 -
Aip03g01976 654 Pfam D-mannose binding lectin 73 178 IPR001480 -
Aip03g01976 654 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 18 654 - -
Aip03g01976 654 SUPERFAMILY Protein kinase-like (PK-like) 474 654 IPR011009 -
Aip03g01976 654 Pfam S-locus glycoprotein domain 211 317 IPR000858 GO:0048544
Aip03g01976 654 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 654 - -
Aip03g01976 654 SMART ntp_6 338 418 IPR003609 -
Aip03g01976 654 Gene3D Transferase(Phosphotransferase) domain 1 565 654 - -
Aip03g01976 654 ProSiteProfiles Protein kinase domain profile. 490 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01976 Aip-Chr3 27699008 27702357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01976 434 654 Receptor kinase-like Gene Family AT4G23190 54.113 2.17e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g01976 Pkinase 1.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01976 - - aip:107614884 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01976 03 27699008 27702357 Aip03g01976 03 27699008 27702357 ECH
Aip03g01976 03 27699008 27702357 Aip08g01274 08 19184038 19188842 PCT