Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01975 ATGTTCTTCGTTACACCCTCCACTTCGATAGATAGTTTTGGAATGAATCAATCTATTCGCGACGGTGAAACATTGGTTTCAGCTGGTGGAAGTTTCGTGGTTGGTTTCTTCAGCCCTGGAACTTCAACAAACCGATATTTGGGTGTGTTTTATAAAGATGCATCAGGAAACCAAACGGTTATGTGGGTAGCCAACAGAGAAAAGCCCCTTCAAAACAAATCCGGGATCTTAAAGTTCAATGAAAATGGGACTCTCCAACTTTTCAGTGGCACAACCAACACCAGTGTTTGGTCCTCCAACATTTCAACCAAAGACTTGAACAGTAACTCTTCAACTGCACAGCTCCTGGATTCGGGAAATCTTATAGTGAAAAGTTCAGATGATGGAAGCAAGATTCTGTGGCAGAGTTTCGATTTTCCCGGCGACGTATTGATGCCGGGAATGAAGATTGGATTGAATTTAGTTACAGGTCTGGATAGATATCTGTCAACCTGGAAAAGCGCCGACGACCCGGCCCGGGGAGATTATTCTATAAAATTTGATCCCAGAGGATATCCACAAATAATTCAAATGAAGGGGGTTGTATTGAATGCCAGAGAAGGGTCCTGGAATGGCCTTTATTTCACTGGCTATCCATATTTGGTGCAGAACAATATGTTTCGACGCGACTTCTTTTTTAACGGTGAAGAAATGTATTATAAGTCGGAAATTCTTGACGGATCAACTTTTAGAATAAATCGAATGATGCCTTCAGGTATTTGGCAAACTACTACATGGACGGGACAAGGAAGAGGTCAGGTGAAAACAACCACATCCGGGGGACTGGAAGATTGTGACAATTTTGCATTTTGTGGTTCAAATTCTGTATGCAATATGGTTGATAATGATGCAGCCTGTGAGTGCCTCAAAGGTTATGTTCCAAAGTTTCCTGAACAATGGAATGTGTCACATTGGTCTAACGGTTGTGTTAGAAAGACTGCGTCTAAGTGTGATATTACAGACGGATTCTCGAAATACATAAACATGAAATTGCCGGATACATCTTCTTCATGGTTTGATAAGACAATGAATCTTGAGGAATGTCAGAGGTCATGCTTGAAAAACTGTTCCTGTACGGCGTATGCGAATTTGGATATCCGTAATGGAGGAACTGGCTGTCTACTTTGGTTCAATCATCTTGTTGACATGAGGCAATTTAATCAAAGGGGTCAAGACCTTTTCATCAAAGTCCCTAACTCAGAGTTAGCTAATGAACATGGAAACATGAAGAAGAAGAAGAATGTTGCAATTGTAGTAGCTGGAGTGATTATTTTTGGATTAATCATATGTGCCAGCATAGTGCTCATTAAATATCCAGGGTTAGCAAGAAATATATGGAAAAACAAGCAAAGACAGGTAGACGTTGATCTCCCAATATTCGATTTCTCAGTCTTAGCTAAAGCTACTGACAACTTTTCAAGCAACAAAAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAACATTGGAAAATGGAGAAGAAATTGCTGTCAAGAGACTTTCTAGAGGCTCCAAACAAGGTGTCAAGGAATTTAAGACTGAAGTTGCGTTAATAGCTAAACTTCAACACCGTAATCTTGTAAAGCTTCTCGGTTGTTGCATTCAGGGAGGAGAAAAAATATTGATCTATGAATTCATGCCAAATAAAAGTTTGGACCACTTTGTTTTTGATCAAACTGGAAGCAAAGTTTTGCATTGGAATATGCGTTTGCATATTATAAGTGGAATTGCTAGAGGGCTTCTTTATCTTCATCAAGATTCAAGACTAAGAATTATTCACAGAGATCTAAAGACCAGTAACATTCTCCTTGACAGTAACATGAATCCAAAAATATCAGATTTTGGATTAGCGAGGGTTTTTGGAGGTGATCGTGTAGAGGCCAACACAATAAGAGTAGTAGGAACTCATGGTTATATGCCTCCTGAGTATGCTGTTTATGGATCTTATTCAGTTAAGTCTGATGTCTTTAGCTTCGGTGTTATTGTGCTAGAGATGCTTAGTGGGAGAAAGAACAGAGAATTTTTTGAAGAGCAACATCATCATAACCTTCTTGGACATGCATGGAGATTGTGGAGTGAGGGTAGGCCATTGGAACTTATGGATAGCTTTATGAGAGATTCAGTTATTATATCAGAAGTGATAAGGTGCATTCACATAGGGCTATTGTGTGTGCAAGAGAGGCCAGATGATAGGCCGGACATGTCTTCTGTTGTTCTAATGTTGAATGGTGAGAGAGCATTGCCTAATCCAAGGCAACCAGGGTTTTATCCACATGAAGTGGGTTCTTCAACAAGCAAACATGAACTCTCTTCCACTAATGAAATTTCCATTTCATTGATAGAGGCAAGATAG 2397 0.3984 MFFVTPSTSIDSFGMNQSIRDGETLVSAGGSFVVGFFSPGTSTNRYLGVFYKDASGNQTVMWVANREKPLQNKSGILKFNENGTLQLFSGTTNTSVWSSNISTKDLNSNSSTAQLLDSGNLIVKSSDDGSKILWQSFDFPGDVLMPGMKIGLNLVTGLDRYLSTWKSADDPARGDYSIKFDPRGYPQIIQMKGVVLNAREGSWNGLYFTGYPYLVQNNMFRRDFFFNGEEMYYKSEILDGSTFRINRMMPSGIWQTTTWTGQGRGQVKTTTSGGLEDCDNFAFCGSNSVCNMVDNDAACECLKGYVPKFPEQWNVSHWSNGCVRKTASKCDITDGFSKYINMKLPDTSSSWFDKTMNLEECQRSCLKNCSCTAYANLDIRNGGTGCLLWFNHLVDMRQFNQRGQDLFIKVPNSELANEHGNMKKKKNVAIVVAGVIIFGLIICASIVLIKYPGLARNIWKNKQRQVDVDLPIFDFSVLAKATDNFSSNKKLGEGGFGPVYKGTLENGEEIAVKRLSRGSKQGVKEFKTEVALIAKLQHRNLVKLLGCCIQGGEKILIYEFMPNKSLDHFVFDQTGSKVLHWNMRLHIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDSNMNPKISDFGLARVFGGDRVEANTIRVVGTHGYMPPEYAVYGSYSVKSDVFSFGVIVLEMLSGRKNREFFEEQHHHNLLGHAWRLWSEGRPLELMDSFMRDSVIISEVIRCIHIGLLCVQERPDDRPDMSSVVLMLNGERALPNPRQPGFYPHEVGSSTSKHELSSTNEISISLIEAR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01975 798 Gene3D - 7 137 IPR036426 -
Aip03g01975 798 ProSiteProfiles PAN/Apple domain profile. 330 411 IPR003609 -
Aip03g01975 798 SMART blect_4 16 140 IPR001480 -
Aip03g01975 798 Pfam Protein tyrosine and serine/threonine kinase 487 753 IPR001245 GO:0004672|GO:0006468
Aip03g01975 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Aip03g01975 798 PIRSF SRK 1 798 IPR024171 GO:0004674
Aip03g01975 798 SMART ntp_6 331 410 IPR003609 -
Aip03g01975 798 Gene3D Phosphorylase Kinase; domain 1 459 560 - -
Aip03g01975 798 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 795 - -
Aip03g01975 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 171 IPR036426 -
Aip03g01975 798 Pfam PAN-like domain 330 396 IPR003609 -
Aip03g01975 798 MobiDBLite consensus disorder prediction 764 784 - -
Aip03g01975 798 CDD PAN_AP_plant 333 411 - -
Aip03g01975 798 CDD B_lectin 16 140 IPR001480 -
Aip03g01975 798 Pfam S-locus glycoprotein domain 199 309 IPR000858 GO:0048544
Aip03g01975 798 SMART serkin_6 485 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01975 798 Gene3D Transferase(Phosphotransferase) domain 1 561 764 - -
Aip03g01975 798 ProSiteProfiles Protein kinase domain profile. 485 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01975 798 Pfam D-mannose binding lectin 59 166 IPR001480 -
Aip03g01975 798 ProSiteProfiles EGF-like domain profile. 274 311 IPR000742 -
Aip03g01975 798 CDD STKc_IRAK 491 758 - -
Aip03g01975 798 Gene3D Hepatocyte Growth Factor 327 408 - -
Aip03g01975 798 SUPERFAMILY Protein kinase-like (PK-like) 468 756 IPR011009 -
Aip03g01975 798 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 795 - -
Aip03g01975 798 ProSiteProfiles Bulb-type lectin domain profile. 10 136 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01975 Aip-Chr3 27621909 27682111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01975 424 770 Receptor kinase-like Gene Family AT4G23230 53.521 2.23e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g01975 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01975 - - aip:107614885 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01975 03 27621909 27682111 Aip03g01975 03 27621909 27682111 ECH
Aip03g01975 03 27621909 27682111 Aip08g01226 08 18133138 18136269 PCT