Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01972 ATGGCCAAATTCATCAGAACCTTTCTATTTGTCGTAACCGAACTCCTTATAGTATTCCCTCCATCATCACTTCCAACCGATACCATAACACAATTTGAGTCACTTCGTGATGGCAATACCTTGGTTTCTGAAGATGAAAGCTTTGAGATGGGTTTCTTCAGTCCCAGTAATAACTCAAACCGCTACCTTGGAATTTGGTACAAAGGAATTCCAGTTAAAACTGTTGTTTGGGTTGCCAACCGTGAAAATCCGGTCAAAGACAACTCCAGTAAATTGAGCATCAACTCAGAAGGAAGACTTATGATCCTCAGCCATAACAAAACTCCTGTTTGGTCAGCAAACTCCACAACACAGAGGCAAGTAGTGAGACCAATTTTGCAACTTTTAAACTCAGGGAACTTGGTCCTAAGAGAAGAAAAAGACAAGGATTTCAAAAACTATTTATGGCAGAGCTTTGACTATCCATCCGATACATTTTTACCAGGGATGAAGATTGGTTGGAATCTGAAAAGTGGCCTTAATAGGCAGTTATCAGCATGGAAGAATTGGGATGATCCTTCTCCAGGAGATTTAACTTGGGGACTTGTACTTGGAAGCACTCCTGAGTTGGTTATGTGGAAAAACACTACAGAGTACTATAGGAGTGGTCCATGGAATGGGGAAAGATTTAGCGGCAAAACCACTGCGCTTTTCCAATTAGAATTCGTGTCCACCAGTGATGAGGTGTTTTATACATACAACCTCAGCTCAGTAATCACAAGAGTCATTCTAAACGAATCGGTTTATTCACGTCAGCGCTATAATTGGATCCCAGAGAACCAGACTTGGCGGCTATATTCATCCGTGCCTCGCGACAATTGTGATAACTATAATCTTTGTGGTGCTTATGGTAACTGTCTTGTGAATGAGTCACCACCCTGCGAGTGTCTAACAGGTTTCAAGCCGAAACTATTCAGAAACTGGGACGCATTGGACTGGACTCAAGGATGCGTGCAAAGTGAAGAATGGAGGTGTCAAGCGAAAAACAAAGATGGTTTTCAGAAATTTAGTGGGTTGAAAATGCCAGATACTACCAAGTCTTGGGTGAGTAGGAATTTGACACTTGATGATTGCAGGGTCAAGTGCTGGGAGAATTGTTCTTGCACTGCCTATGCAAATTTAGATATCAGAGGAGAAGGTAGCGGGTGTCAGATTTGGTTTGGAGATTTAATGGATCTCAGGGTTGCTTCAGTTTCGGGCCAAGATTTGTACATTCGGATGCCTGTATCACCAACTGGTTCCTCCAACAAAACTACTGCAAATGAAGAAAGTTTAAAGGGTGGACAAAGAAAAAAACTTCTTGTGGCAATTCCAGTTAGCTTTCTCCTGGTTATTATGATTGTTTTAATTTTCAGTTACTGTTATTGGAGGAAAAGAAAGCTTAAAGAAAAAATAGGAAACATATCACAAGAAGAGGGAGACAAAGTCCATGAAGACAAATTTGAACTTCCATTCTTTGATTTTACAACAATAGTTCGTGCCACTAATAATTTCTCAAGTGATAAGAGGCTTGGCCAAGGTGGTTTTGGGCCCGTGTACATGGGTATATTAATCAATGGGCAAGAGGTTGCAGTCAAAAGGCTGGCGCATAAATCTGGACAAGGAGCAAGAGAATTTAAGAATGAAGTTATATTATGTGCCAAACTTCAACACCGCAATCTTGTTAAGGTTCTTGGTTGTTGCATCCACGGAGAAGAGAGAATATTAATCTATGAATATATGTCCAATAAAAGTTTAGATTCTTTTCTTTTTGATTCTTCTCAAAGGGAGCTCCTTGATTGGCCTAAACGATTTAACATCATATTTGGAATTGCTCGTGGACTTCTATATCTTCACCAAGATTCAAGATTGAGAATTATACATAGAGATCTTAAGACAAGCAACATTTTATTGGACAATGAATTGAATCCAAAGATTTCAGATTTTGGGGTGGCACGAATGTTTACTGGAAATCAAATAGAAGCAAATACAAAAATGGTAGCAGGGACATATGGCTACATGGCACCAGAATATGCAATTGAGGGAATATTTTCTATCAAATCTGATGTTTTTAGCTTCGGAATAATATTATTGGAGGTGGTAAGTGGACGAAAAAATACAGGAGTTTTTTATCCTAATCATGGATTTAATCTTCTTGGACATGTAAGTGATTATTGA 2196 0.3925 MAKFIRTFLFVVTELLIVFPPSSLPTDTITQFESLRDGNTLVSEDESFEMGFFSPSNNSNRYLGIWYKGIPVKTVVWVANRENPVKDNSSKLSINSEGRLMILSHNKTPVWSANSTTQRQVVRPILQLLNSGNLVLREEKDKDFKNYLWQSFDYPSDTFLPGMKIGWNLKSGLNRQLSAWKNWDDPSPGDLTWGLVLGSTPELVMWKNTTEYYRSGPWNGERFSGKTTALFQLEFVSTSDEVFYTYNLSSVITRVILNESVYSRQRYNWIPENQTWRLYSSVPRDNCDNYNLCGAYGNCLVNESPPCECLTGFKPKLFRNWDALDWTQGCVQSEEWRCQAKNKDGFQKFSGLKMPDTTKSWVSRNLTLDDCRVKCWENCSCTAYANLDIRGEGSGCQIWFGDLMDLRVASVSGQDLYIRMPVSPTGSSNKTTANEESLKGGQRKKLLVAIPVSFLLVIMIVLIFSYCYWRKRKLKEKIGNISQEEGDKVHEDKFELPFFDFTTIVRATNNFSSDKRLGQGGFGPVYMGILINGQEVAVKRLAHKSGQGAREFKNEVILCAKLQHRNLVKVLGCCIHGEERILIYEYMSNKSLDSFLFDSSQRELLDWPKRFNIIFGIARGLLYLHQDSRLRIIHRDLKTSNILLDNELNPKISDFGVARMFTGNQIEANTKMVAGTYGYMAPEYAIEGIFSIKSDVFSFGIILLEVVSGRKNTGVFYPNHGFNLLGHVSDY 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01972 731 Gene3D Transferase(Phosphotransferase) domain 1 587 729 - -
Aip03g01972 731 CDD PAN_AP_plant 339 421 - -
Aip03g01972 731 Pfam D-mannose binding lectin 74 181 IPR001480 -
Aip03g01972 731 CDD B_lectin 33 155 IPR001480 -
Aip03g01972 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Aip03g01972 731 SUPERFAMILY Protein kinase-like (PK-like) 494 714 IPR011009 -
Aip03g01972 731 SMART blect_4 32 155 IPR001480 -
Aip03g01972 731 Gene3D Hepatocyte Growth Factor 337 412 - -
Aip03g01972 731 Pfam S-locus glycoprotein domain 213 316 IPR000858 GO:0048544
Aip03g01972 731 ProSiteProfiles Protein kinase domain profile. 511 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01972 731 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 728 - -
Aip03g01972 731 Gene3D - 23 152 IPR036426 -
Aip03g01972 731 PIRSF SRK 1 730 IPR024171 GO:0004674
Aip03g01972 731 Gene3D Phosphorylase Kinase; domain 1 472 586 - -
Aip03g01972 731 SMART ntp_6 341 420 IPR003609 -
Aip03g01972 731 Pfam PAN-like domain 338 406 IPR003609 -
Aip03g01972 731 SMART serkin_6 511 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01972 731 Pfam Protein tyrosine and serine/threonine kinase 514 710 IPR001245 GO:0004672|GO:0006468
Aip03g01972 731 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Aip03g01972 731 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Aip03g01972 731 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 186 IPR036426 -
Aip03g01972 731 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 34 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01972 Aip-Chr3 27573449 27577287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01972 429 716 Receptor kinase-like Gene Family AT4G23190 52.778 2.17e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g01972 PK_Tyr_Ser-Thr 8.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01972 - - adu:107478358 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01972 03 27573449 27577287 Aip03g01972 03 27573449 27577287 ECH