Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01971 ATGAGAGATGGTGAGACCGTAGTTTCAGTTGATGGAAGCTTTGAACTAGGTTTTTTCAGTCCTAAAACTTGCACAAGTCGGTATTTGGGTGTGTGGTACAGAGATGCATCAAGAAACCCGACAGTAGTGTGGGTGGCCAATAGAGAAAGACCCCTTCAAAGCACGTCCGGAGTCTTGAAATTCAGTGACAAGGGAATTCTTCAACTTCTCAATGACGCAAACACTAGTGTTGTTTGGTCATCCAATATATCTTCATCCCTCCAAGCTTCAAATAACTTAACTGCACAGCTCTTGGACTCGGGAAATCTTGTTGATGCTGCGGAGGACAACTTCTTGTGGCAGAGTTTTGACTATCCTTCTGATACGTTGATGCCAGGAATGAAACTTGGATTAAACTTAGTTACTGGTCTGAATAGATTTCTATCGTGTTGGAAAAGCTCAAATGACCCTGCTATAGGAGAGTATTCTTTAAAAATTAAACCCAAAGGGTATCCGCAACTAGTACAAATGAAGGGATCAGTAATAGTTACTAGAGCAGGACCATGGAATGGTCTTTCTTTTTCAGGATATCCATATGCCAACAACATATATAGCATCGATTTTGTAGTGAATGATGAAGAGATTTATTATCAGGTCACAATGAGTGATAGGTCCCTTTTCTCCATATACAGAACAATCACTTCAGGTACGGGTAATGTTTTGGTTTGGACAAGTCAAACAAGAAATCAGGTTAAAAACACTCCAACTCAGCTGGTAGATCAGTGTGAAATGTATGCCTTTTGTGGTTCAAATTCTATATGCTATATGGATGGTAATGCTCCAACATGTGAATGTTTGAAAGCATATGTTTCCAAATTTCCCAGACAATGGAATATGTCTGATTGGTCTAGTGGTTGCGTCAGAAAGACTTGGTTAGATTGTAATAACACAGATGGGTTCCTGAGGTACAGAGATATGAAGTTGCCAGATACATCTTCTTCAACGTATAATAAGACAATGAATCTTGAGGAATGTCGAGAATCCTGCTTGAAAAACTGTTCTTGTACAGCGTATGCAAATATGGATATTCGTAATGGAGGAAGTGGCTGCCTACTTTGGTTTGATCATCTCATTGACATGAGGATGTTCTCTAAAGGAGGACAAGACCTTTACATTAAAGTCCCTGCTTCAGAATTAGGTAACTATTTTTCTTCATCCCTCCTCAATTTCCCTTCTGATTTTTTCTACAAAAAAAATATGCTACTACTAAGTGTTGTAGACTCAATTGTTATGCGTTGTTGTTACCACCAAACAGGTGTAGCAAGAAATATATGCAAGAAAAAGCATAGTTGGAAAGATGTCGATCTACCGATATTTGATTTTTCAGTCATAGCTAAAGCTACAGGAAACTTTGCATCTAATAAAAAGCTTGGAGAAGGTGGTTTTGGTCCCGTATATAAGGGCATACTTCAAGATGGTCGAGAAGTAGCTGTAAAAAGGCTTTCAAAAAGGTCTACTCAAGGGCTGGAAGAATTAAAAAATGAGGTGGTGTTGATAGCTAAACTTCAGCATCGGAATCTTGTCAAGCTTCTTGGTTGTTGTATTCAAGAGTCAGAAAAAATACTAATCTATGAGTTCATGCCTAACAAAAGTTTAGACCAATTTATTTTCGATGAAACTGGACGAAAGCGGCTAGATTGGCTAAAGCGTTTCAACATTATTAGTGGAATTGCTCGAGGACTTTTTTATCTTCATCAAGATTCTATATTGAGGATAATTCATAGAGATCTAAAAACTAGTAATATTTTATTAGATGCAAATTTTAATCCCAAGATATCACATTTTGGTTTAGCTCGAACATTTTTAGATGATCAAGTTGAGGAAAATACAAATAGAATTGCTGGAACATACGGTTATATGCCTCCTGAATATGCATTACGAGGACAATTCTCCATGAAATCAGATATTTTTAGTTATGGTGTAATAATATTAGAGTTGATAAGTGGAAAGAAGAATAGAGAATTTTCAAACTCTGAAAATTACCTTAATCTTCTTGGACATGCATGGAAATTGTGGATTAATGAGAGGCCACTGGAATTATTGGATGAAGTATTAAGGGAATGGTGCAACCCTACTGAAGTCATAAGATGCATACAAGTAGGTTTATTATGTGTGCAACAAAGGCCAGAAGATAGGCCTAACATGTTATCGGTGGTTCTAATGCTAAATGGTGAGAAATGGTTGCCCCAACCAAAATTTCCTGCATTTTATGTAGATTGTGTTGGGACACCGAAAGAAGAATCTTTATCGGCAAACTATGTAAAATTCTCAGCTAATGAAGTTTCCATCACAATGTTGGATGCAAGATAA 2349 0.3721 MRDGETVVSVDGSFELGFFSPKTCTSRYLGVWYRDASRNPTVVWVANRERPLQSTSGVLKFSDKGILQLLNDANTSVVWSSNISSSLQASNNLTAQLLDSGNLVDAAEDNFLWQSFDYPSDTLMPGMKLGLNLVTGLNRFLSCWKSSNDPAIGEYSLKIKPKGYPQLVQMKGSVIVTRAGPWNGLSFSGYPYANNIYSIDFVVNDEEIYYQVTMSDRSLFSIYRTITSGTGNVLVWTSQTRNQVKNTPTQLVDQCEMYAFCGSNSICYMDGNAPTCECLKAYVSKFPRQWNMSDWSSGCVRKTWLDCNNTDGFLRYRDMKLPDTSSSTYNKTMNLEECRESCLKNCSCTAYANMDIRNGGSGCLLWFDHLIDMRMFSKGGQDLYIKVPASELGNYFSSSLLNFPSDFFYKKNMLLLSVVDSIVMRCCYHQTGVARNICKKKHSWKDVDLPIFDFSVIAKATGNFASNKKLGEGGFGPVYKGILQDGREVAVKRLSKRSTQGLEELKNEVVLIAKLQHRNLVKLLGCCIQESEKILIYEFMPNKSLDQFIFDETGRKRLDWLKRFNIISGIARGLFYLHQDSILRIIHRDLKTSNILLDANFNPKISHFGLARTFLDDQVEENTNRIAGTYGYMPPEYALRGQFSMKSDIFSYGVIILELISGKKNREFSNSENYLNLLGHAWKLWINERPLELLDEVLREWCNPTEVIRCIQVGLLCVQQRPEDRPNMLSVVLMLNGEKWLPQPKFPAFYVDCVGTPKEESLSANYVKFSANEVSITMLDAR 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01971 782 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 780 - -
Aip03g01971 782 SUPERFAMILY Protein kinase-like (PK-like) 449 754 IPR011009 -
Aip03g01971 782 Pfam PAN-like domain 307 373 IPR003609 -
Aip03g01971 782 Gene3D Phosphorylase Kinase; domain 1 438 539 - -
Aip03g01971 782 CDD STKc_IRAK 470 737 - -
Aip03g01971 782 SMART serkin_6 464 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01971 782 CDD PAN_AP_plant 305 388 - -
Aip03g01971 782 SMART blect_4 2 119 IPR001480 -
Aip03g01971 782 CDD B_lectin 3 119 IPR001480 -
Aip03g01971 782 Gene3D - 1 116 IPR036426 -
Aip03g01971 782 ProSiteProfiles Bulb-type lectin domain profile. 1 118 IPR001480 -
Aip03g01971 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Aip03g01971 782 ProSiteProfiles PAN/Apple domain profile. 307 388 IPR003609 -
Aip03g01971 782 SMART ntp_6 308 387 IPR003609 -
Aip03g01971 782 Pfam S-locus glycoprotein domain 178 285 IPR000858 GO:0048544
Aip03g01971 782 Gene3D Hepatocyte Growth Factor 304 384 - -
Aip03g01971 782 Pfam Protein tyrosine and serine/threonine kinase 467 732 IPR001245 GO:0004672|GO:0006468
Aip03g01971 782 Gene3D Transferase(Phosphotransferase) domain 1 540 741 - -
Aip03g01971 782 SUPERFAMILY alpha-D-mannose-specific plant lectins 42 150 IPR036426 -
Aip03g01971 782 ProSiteProfiles Protein kinase domain profile. 464 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01971 782 PIRSF SRK 1 782 IPR024171 GO:0004674
Aip03g01971 782 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 780 - -
Aip03g01971 782 Pfam D-mannose binding lectin 41 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01971 Aip-Chr3 27497495 27502857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01971 452 782 Receptor kinase-like Gene Family AT4G23140 54.386 1.11e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g01971 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01971 - - aip:107614884 996.882