Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01967 ATGGGTAGCACCACTGAAGGTTCTGCATTTCAGGTCACAGCCAATCCATGGGATCTTTCTAGGGTGCCAGGAGGATCATCAGGAGGATCGGCAGCTGCAGTTTCTGCCAAGCAGTGTGTGGTATCACTGGAAAGTGATACTGGTGAAAGCGTGAGACAGCCAGCATCCTTTTGCGGTGTTGTAGTCATCCAAATTAATGGCATAAAATATTTCAAAATTGACGAGGAGCAAGTAATTGATGGACTTGATAAAGCTGTGATGAACATGAAGAAAGGGGAAGTTGCATTGGTGACCATACATCCTGAGTATGCTTTTGGCTCATCTGGGTCAACTCAGGAATTGGCCACCGTTCTTCCCAACTCCAACGTGTACTATGAAGTTGAGCTGGTTTCCTTTGTAAAGGAAAAGGAATGTGGGATCTGA 423 0.4563 MGSTTEGSAFQVTANPWDLSRVPGGSSGGSAAAVSAKQCVVSLESDTGESVRQPASFCGVVVIQINGIKYFKIDEEQVIDGLDKAVMNMKKGEVALVTIHPEYAFGSSGSTQELATVLPNSNVYYEVELVSFVKEKECGI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01967 140 Gene3D Amidase signature (AS) domain 1 64 IPR036928 -
Aip03g01967 140 PANTHER TRANSAMIDASE 1 63 IPR000120 GO:0003824
Aip03g01967 140 Gene3D - 65 132 IPR046357 GO:0003755
Aip03g01967 140 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 133 IPR001179 GO:0003755
Aip03g01967 140 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 71 130 IPR001179 GO:0003755
Aip03g01967 140 Pfam Amidase 1 61 IPR023631 -
Aip03g01967 140 SUPERFAMILY FKBP-like 70 137 - -
Aip03g01967 140 PANTHER GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A 1 63 - -
Aip03g01967 140 SUPERFAMILY Amidase signature (AS) enzymes 1 61 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01967 Aip-Chr3 27404821 27406934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01967 71 139 Calmodulin-binding Proteins AT5G48570 40.000 8.42e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01967 - - ahf:112763143 127.872